Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120843g00034 ATGGCTACGAGTGAGGTGAAGTTGTTGGGTGCATGGCCAAGTCCATTTGTATTGAGGGCTAGAATTGCTCTTAACATAAAGTCAGTGGATTATGAGTTCCTTCAAGAGACATTTCAACCCAAAAGCCAACTTCTTCTACAATCCAACCCTGTTTACAAGAAAATCCCTGTTCTTATTCATCAAGATAAACCTATCTGTGAGTCCTTGATCATTGTTCAGTATGTTGACGATGTTTGGTCCTCCAACGGTCCCTCCATTCTCCCGCTGGATCCTTATGATCGCGCCATTGCGCGATTCTGGGCAACTTATGTTGACGACAAGTTGTTCCCAGCCATGAAATCCATTGCAGGAGCAAAAGGAGAGGAAGAAAGAAAGAGGTTGATAAAGGAAGTGGAAGAAGGATTGGCACTACTAGAGGATGCATTTAAAAAGATCACCACCAAAGGAAATAATAATTATTCATTTTTTGGTGGTGACCAAATTGGGTACCTTGATATTGCATTTGGGAGCTTATTGGGGTGGCTAAGGGTGACAGAGATAACCAATGGTGTGAAGCTGTTTGACCAAGTTAAAACACCTGGTTTGGTGAATTCGGCTGAGAGTTTCTCTTCACATGGTGCTGTCAAAGATGTTATGCCTGAGACTCATAAACTTCTTGAGTTTGCTAAGACACTTATGCCCAAATTGGCTCATACAAATTAG 702 0.4202 MATSEVKLLGAWPSPFVLRARIALNIKSVDYEFLQETFQPKSQLLLQSNPVYKKIPVLIHQDKPICESLIIVQYVDDVWSSNGPSILPLDPYDRAIARFWATYVDDKLFPAMKSIAGAKGEEERKRLIKEVEEGLALLEDAFKKITTKGNNNYSFFGGDQIGYLDIAFGSLLGWLRVTEITNGVKLFDQVKTPGLVNSAESFSSHGAVKDVMPETHKLLEFAKTLMPKLAHTN 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120843g00034 233 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 220 IPR045073 -
Stsc120843g00034 233 SUPERFAMILY GST C-terminal domain-like 78 228 IPR036282 -
Stsc120843g00034 233 SUPERFAMILY Thioredoxin-like 6 109 IPR036249 -
Stsc120843g00034 233 SFLD Glutathione Transferase (cytosolic) 2 230 IPR040079 -
Stsc120843g00034 233 Pfam Glutathione S-transferase, N-terminal domain 5 76 IPR004045 -
Stsc120843g00034 233 FunFam Glutathione S-transferase U9 87 232 - -
Stsc120843g00034 233 Gene3D - 86 231 - -
Stsc120843g00034 233 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Stsc120843g00034 233 CDD GST_N_Tau 6 79 - -
Stsc120843g00034 233 Pfam Glutathione S-transferase, C-terminal domain 99 195 IPR004046 -
Stsc120843g00034 233 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 225 IPR010987 -
Stsc120843g00034 233 CDD GST_C_Tau 91 225 IPR045074 GO:0004364|GO:0006749
Stsc120843g00034 233 Gene3D Glutaredoxin 1 85 - -
Stsc120843g00034 233 FunFam Glutathione S-transferase GSTU6 1 86 - -
Stsc120843g00034 233 SFLD Main.3: Omega- and Tau-like 2 230 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120843g00034 Stsc-Chr120843 152925 153851 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120843g00034 1 228 Glutathione S-transferase Gene Family AT1G10370 62.719 1.84e-99 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120843g00034 K00799 - adu:110272419 349.747