Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120843g00033 ATGACTGAGAAGAATAATGGTGAGGTGGTGAAGTTGCTGGGGGCATGGCCAAGCCCTTTTGTGATAAGAGCTCGAATAGCACTCAACATAAAATCAGTGGAATATGAGTTTATTGAAGAGACTTTTGGGAAGAGAAGCGAGCTTCTTCTAAAGTCTAACCCTGTGAACAAGCAAATACCAGTTCTGATTCATGGTGACAAATGCATCCCTGAATCCATGCTTATTGTTCAGTATATCGATGAAGTTTGGTCCTCTGCAGGCCCTCCTATTCTTCCTTCTCTTCCTTTTGATCGTGCCATCGCCAGATTTTGGCCTACTTATATTGATGATAAGTGGTTCCCGACCTTGAAATCCATTGTGTTGGGACTAGGCACAGAGGCTACAGAGGAAAAGTTGAGAAAAGTAAGAGAAGGGTTGGTATTGTTAGAGGATGCATTTAACAAAATAAGCAAAGGAAAAGATTTCTTTGGAGGTGAGCAAATTGGGTACATAGATATTGGGTTTGGAAGCTTCTTGGCATGGCTGAAGATGGTGGAGGTGACTGAAGGTGTGAATTTGGTGGATGAAACCACCACTCCTGCCTTGGCTAAGTGGGTTCCAAAGTTTTGTGCACATGATGCTGTTAAGGATGTTCTGCCACCCATTGAGAAGCTTATTGGGTTTTCTAAGATACTAAGGTCCAACGTAGATCTTGTTATTAATCCTAAGTAA 711 0.4219 MTEKNNGEVVKLLGAWPSPFVIRARIALNIKSVEYEFIEETFGKRSELLLKSNPVNKQIPVLIHGDKCIPESMLIVQYIDEVWSSAGPPILPSLPFDRAIARFWPTYIDDKWFPTLKSIVLGLGTEATEEKLRKVREGLVLLEDAFNKISKGKDFFGGEQIGYIDIGFGSFLAWLKMVEVTEGVNLVDETTTPALAKWVPKFCAHDAVKDVLPPIEKLIGFSKILRSNVDLVINPK 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120843g00033 236 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 94 231 IPR010987 -
Stsc120843g00033 236 Gene3D Glutaredoxin 4 90 - -
Stsc120843g00033 236 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 8 87 IPR004045 -
Stsc120843g00033 236 SFLD Main (cytGST) 8 228 - -
Stsc120843g00033 236 FunFam Glutathione S-transferase GSTU6 5 90 - -
Stsc120843g00033 236 SUPERFAMILY Thioredoxin-like 10 113 IPR036249 -
Stsc120843g00033 236 FunFam Glutathione S-transferase U9 91 231 - -
Stsc120843g00033 236 SUPERFAMILY GST C-terminal domain-like 81 226 IPR036282 -
Stsc120843g00033 236 CDD GST_N_Tau 10 83 - -
Stsc120843g00033 236 CDD GST_C_Tau 95 225 IPR045074 GO:0004364|GO:0006749
Stsc120843g00033 236 Gene3D - 91 230 - -
Stsc120843g00033 236 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 12 217 IPR045073 -
Stsc120843g00033 236 Pfam Glutathione S-transferase, C-terminal domain 103 205 IPR004046 -
Stsc120843g00033 236 SFLD Main.3: Omega- and Tau-like 8 228 IPR045073 -
Stsc120843g00033 236 Pfam Glutathione S-transferase, N-terminal domain 9 81 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120843g00033 Stsc-Chr120843 150402 151516 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120843g00033 8 225 Glutathione S-transferase Gene Family AT1G10360 55.046 4.12e-88 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120843g00033 K00799 - adu:110272419 293.508