Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120842g00047 ATGTGCATTCCATGCCGGTCCACAAGGAAGACGAGGTTTAAGTTGTTCTTGGCACCTACAAGGCCATGTGAGGGCAAGGTCACTCAGGTGTACCGCCGCAAAGGGGTGATCCCCATCAAACGCATCATGCGCGAGAAGGCTAAGGGCCGTGCCGCCGCCAATAAGGAGAAGGGTACCAAGTTCGCTCCAGAAGATATCTCGCAGACCATCGATTAA 216 0.5417 MCIPCRSTRKTRFKLFLAPTRPCEGKVTQVYRRKGVIPIKRIMREKAKGRAAANKEKGTKFAPEDISQTID 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120842g00047 71 MobiDBLite consensus disorder prediction 48 62 - -
Stsc120842g00047 71 CDD KOW_RPL26 24 68 IPR041988 GO:0003723
Stsc120842g00047 71 MobiDBLite consensus disorder prediction 48 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120842g00047 Stsc-Chr120842 288285 288591 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120842g00047 24 71 Cytoplasmic Ribosomal Protein Gene Family AT3G49910 44.444 2.27e-13 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120842g00047 K02898 - gmx:100775705 65.4698