Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120842g00046 ATGGATTCCCTTTCAATGCTCCCAAAAGTAACATTGATATCTTTAACTCTATTTTTCCTCTACAAAGTATGGAGAATAACAACTAGGAAAAAATCTAGTACTAGTCAAAAAACAAGTCACATGAAAAAACCACCTCAACCATATGCATTACCATTAATTGGTCACCTCCATCTACTAGGAACCAAAACCCCACTTGCAAGAACCTTTGCTTCCATGGCAGATAAGTATGGCCCTATATTCCAAATCAATTTTGGATCATTACCCGCCATTGTCGTCTCCAACAAAGAAGGAATCAAAGAATGTTTCACCACAAACGACAAAGTTCTTGCCTCACGCAACCCATCAAGCCGCGGAACTCACCTTGCTTATAACAATGCCGCCTTTGGATTTTCTCCTTATGGACCCTATTGGGCAAAACAGAGGAAGCTCGCTGTCGTTGAACTCCTCTCCTCTCGCTGCCTAGAATCCTTAAGGCATGTTTTTGAATCCGAGATTGATACTTTGATCAAGGATCTCTTGACTCATTCTTCTTCCTTGGGAAACAAGGCAGTTGTGATGAATGAATGGTTTGAACGGTTGACTTTCAACATAATCACTAAGATGGTGGCTGGAAAGAGGTATTTTAGTTACTTGGAAGATGTGGATGATTTAGAAGCACATAAAGTTGTGAATCTTATAAAAGAGTTCATGCAATTGGCTGGTGGATTTGTTCTTTCAGATGCAATTCCATTGCTTAGGTGGATTGGGGTGGAAGGGAGAGTTCTTAAATCAATGAAGAGAATTGGAAGAGATTTGGACACACTTATTGCAAACTGGGTTGAAGAGCATAAGATTAAGATGAAGGGTAATATGGTAAATAGCTCAAGTGGTGATGATGAGAAGCAAGATTTCATTGATGTCTTGCTATCTATTGTTGAAGATGATCATGAGTCTGGCCATTCTCGTGACACCATCATCAAGGCACATGTGATGAATCTTATCCTAGCGGGGACCGAAACAACATCAACAACACTGACATGGATCATTGCAATTTTGATGAACAACAAACATTCATTGGAGAAAGCACAACAAGAGATTAGCCTCCATGTGGGTAAGAACAGAAAGGTAGAAGCCTCGGATCTAAAAAACCTGACTTATTTACAAGCAATTTTCAAAGAAACTCTAAGGTTATACCCACCAACACCATTACTATTACCTCATGGGGCATTATCGGATTGCAACATCAATGGCTACTTTGTACCGAAAGGTGCAGATGTGTTTCTTAATGTGTGGAAGCTACACAGAGATCCAAGCATTTGGTTGGAGCCTGAGAGGTTCTCACCAGAGAGGTTCATTAATGGCAATGGAGAAGTTGATAATGAAGGTCACCACTTTGAGTATCTTCCTTTTGGGTTAGGGAGAAGGGCTTGCCCTGGATACACATTGGCCACACAAGTGATCCTTATAACAATTGCACGTTTGCTTCAAGCTTTTGATTTTGATTTGTTTATGGATCAACCAGTTGATATGACAGAAGCCTTTAGCTTAACCTCATCTATGTTAAATCCATTACAAATTTGTCTCACCCCACTGGTTAACACTGCACTCTATCAGTAA 1596 0.401 MDSLSMLPKVTLISLTLFFLYKVWRITTRKKSSTSQKTSHMKKPPQPYALPLIGHLHLLGTKTPLARTFASMADKYGPIFQINFGSLPAIVVSNKEGIKECFTTNDKVLASRNPSSRGTHLAYNNAAFGFSPYGPYWAKQRKLAVVELLSSRCLESLRHVFESEIDTLIKDLLTHSSSLGNKAVVMNEWFERLTFNIITKMVAGKRYFSYLEDVDDLEAHKVVNLIKEFMQLAGGFVLSDAIPLLRWIGVEGRVLKSMKRIGRDLDTLIANWVEEHKIKMKGNMVNSSSGDDEKQDFIDVLLSIVEDDHESGHSRDTIIKAHVMNLILAGTETTSTTLTWIIAILMNNKHSLEKAQQEISLHVGKNRKVEASDLKNLTYLQAIFKETLRLYPPTPLLLPHGALSDCNINGYFVPKGADVFLNVWKLHRDPSIWLEPERFSPERFINGNGEVDNEGHHFEYLPFGLGRRACPGYTLATQVILITIARLLQAFDFDLFMDQPVDMTEAFSLTSSMLNPLQICLTPLVNTALYQ 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120842g00046 531 Pfam Cytochrome P450 44 511 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120842g00046 531 PANTHER CYTOCHROME P450 82C3-RELATED 16 530 - -
Stsc120842g00046 531 PRINTS P450 superfamily signature 382 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120842g00046 531 PRINTS P450 superfamily signature 470 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120842g00046 531 PRINTS P450 superfamily signature 461 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120842g00046 531 PRINTS P450 superfamily signature 329 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120842g00046 531 FunFam Cytochrome P450 82C4 33 522 - -
Stsc120842g00046 531 PRINTS E-class P450 group I signature 422 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120842g00046 531 PRINTS E-class P450 group I signature 381 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120842g00046 531 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120842g00046 531 PRINTS E-class P450 group I signature 318 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120842g00046 531 PRINTS E-class P450 group I signature 193 211 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120842g00046 531 PRINTS E-class P450 group I signature 338 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120842g00046 531 PRINTS E-class P450 group I signature 470 493 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120842g00046 531 PRINTS E-class P450 group I signature 460 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120842g00046 531 Gene3D Cytochrome P450 28 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120842g00046 531 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 463 472 IPR017972 GO:0005506|GO:0016705
Stsc120842g00046 531 SUPERFAMILY Cytochrome P450 44 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120842g00046 Stsc-Chr120842 280811 283345 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120842g00046 44 530 Cytochrome P450 AT4G31940 45.473 6.46e-149 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120842g00046 - - adu:107464642 857.055