Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120842g00045 ATGGAGAAATTCCTTTCTCTTCCAACAATATTGCCGCTAGCATTAGCTTTGATCCTTCTATGGAGGATCATGAAGAAATCAAGTCATGAGCAATTGCAAGCACCAGAACTACCCGGTGCACTACCATTGATAGGTCACCTCCATTTACTAGGAACCAAAACTCCACTTGCAAGAACCTTCGCTTCTTTCTCCCATAAGTATGGCCCTATATTCCGAATCCGACTCGGATCATTCCCTGCCATTGTCATCTCCAACAAAGATGGAATCAAAGACTGCTTTACCACGAACGACAAAGCTCTCGCCTCGCGCCCCATGTCCAGCCAGGGAGTATACATCGGTTATAACTACGCCGGCGTCAGCTTCGCTCCTTACGGCTCGTTCTGGACAAAACAGAGGAAGCTAGCTACGCTTGAGCTCTTCTCTTCTCGCCGCGTCGAATCGTTGAGGCATGTGTATGAATCCGAGATCAATGCTTTGATCAAGGACCTGTTATTGTATTCGGCAGGAAATTCGCCAGTTAAAGTCGTCGTGGTGAGCGAATGGTTGGAGCGGTTGACTTTTAATATAATGACAAAGATGATGGCGGGAAAGAGATATTTTAGTTACTTGAAAGATGTGGAGGATGTTGAAGCACAAAGAGTTGTGAAGCTCATAAGAGAATTTATGCGTTTATCTGAAGGGGGTTTGATTCCTTCGGATGTGATTCCTCTGATTGGGTGGTTTGGTATAGAAGGCAAAGTTCTTAAGTCCATGAAAAGAATTGCAAAAGATTTGGACACAATTGTTGGGAGCTGGGTTGAGGAGCACAAAATGAAGGCCAATATGGTAAATAGCTCAAGCGAGAAACAAGATTTTATTGATGTTATGCTTTCTGTGGTTGAAGATGATCCTGATTCTGGCCATACGCGTGACACTATCATTAAAGCTCAAATTATGAGTCATATACTAGCAGGGACAGATACAACGTCGTCAACAATGATATGGATGGTAGCTTTATTGTTAAAGAACAAACATGTTTTGAAGCGTGCACAAGAGGAGATTGATGTTCATGTGGGTAGGGAGAGAAAAGTAGAATCACATGATATTAAAAATCTTGTTTATTTACAAGCTATTCTTAAAGAAACTCTAAGGTTATATCCGGGTGCGCCTCTATTACTACCCCATGAAGCAAGAGAAGATTGTTACATTCATGGCTATTATGTCCCAAAAGGGACATTTGTCTTTGGAAATGTGTGGAAGCTACATAGAGATCCAAGTATTTGGTCAGAGCCTGAGAAGTTTTCACAGAGAGGTTTATTAATGGCAATAATGGAGTACTGA 1320 0.4205 MEKFLSLPTILPLALALILLWRIMKKSSHEQLQAPELPGALPLIGHLHLLGTKTPLARTFASFSHKYGPIFRIRLGSFPAIVISNKDGIKDCFTTNDKALASRPMSSQGVYIGYNYAGVSFAPYGSFWTKQRKLATLELFSSRRVESLRHVYESEINALIKDLLLYSAGNSPVKVVVVSEWLERLTFNIMTKMMAGKRYFSYLKDVEDVEAQRVVKLIREFMRLSEGGLIPSDVIPLIGWFGIEGKVLKSMKRIAKDLDTIVGSWVEEHKMKANMVNSSSEKQDFIDVMLSVVEDDPDSGHTRDTIIKAQIMSHILAGTDTTSSTMIWMVALLLKNKHVLKRAQEEIDVHVGRERKVESHDIKNLVYLQAILKETLRLYPGAPLLLPHEAREDCYIHGYYVPKGTFVFGNVWKLHRDPSIWSEPEKFSQRGLLMAIMEY 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120842g00045 439 Gene3D Cytochrome P450 27 429 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120842g00045 439 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120842g00045 439 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120842g00045 439 PRINTS E-class P450 group I signature 410 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120842g00045 439 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120842g00045 439 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120842g00045 439 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120842g00045 439 PRINTS E-class P450 group I signature 185 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120842g00045 439 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120842g00045 439 Pfam Cytochrome P450 35 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120842g00045 439 PANTHER CYTOCHROME P450 82C3-RELATED 15 428 - -
Stsc120842g00045 439 FunFam Cytochrome P450 82C4 24 431 - -
Stsc120842g00045 439 SUPERFAMILY Cytochrome P450 38 427 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120842g00045 Stsc-Chr120842 274841 276958 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120842g00045 34 427 Cytochrome P450 AT4G31940 47.512 6.90e-124 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120842g00045 - - adu:107464642 576.63