Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120842g00044 ATGGTTCTCATTAAACACTCCATCTACAACCAAATCCAACAAGCCTCTCTTTCCAACAACACTTATCTATGGCTTCTCTTTTTCGCCATCAGCTTCCTCTTCGTCTTCCTCTTCAACCGAACAAGAAAACCCACCACCAAAACCAACATGAACCTTCCACCATCGCCACCAAAACTACCCTTCATTGGAAACCTCCTCCAGCTAGGCACACTCCCACACCGCTCCCTCCGAACCCTCTCTCAAACTTACGGCGACATCATGATGCTACAATTGGGCCAAAGACCCTACCCAACTCTCGTGGTTTCATCCGCAGAAATTTCAAAAGAAATAAACAAAAACTATGACCTAGTTTTCTCAAACCGCCCCCAAAACACGGCCACCAAGATCTTGCTGTACGGCGCCACGGACGTCGGGTTCGGGCTCTACGGAGACGACTGGAGGAAGAAGAGGAAGATTATCGTGCTTCAGCTTCTGAGCACGAGGAGGGTGCAATCATTCGGAGCGATCAGAGAAGAAGAAGTTACGGAGACAGTGAAGGAATTGATGGAAGCGAGTTTGAAGGGTAAAACGGTAAACTTGGGGAAGATGGTGGTTTCAACTGCGAACAACATAGTTTGTAAGTGTGCTTTGGGAGGAACGTACGGAAAAGAAGGTGGGATTCAAGATTTGGCGCGGAGGGTGATGATTTACCTGACGGCTTTTACGGTGAGGGATTATTTTCCGGCATTGGGTTGGGTTGATGTGGTTAGTGGTAAGATTGGGAGGTATAGAGAGACTTTTAGGAAGTTGGATTGTTTGTTTGATAAGGTTATTGAAGAGCATAAGATGATGGCAAAGAATAATGAAGGAGGTGATGATAATAAGAAGAAGGACTTGGTGGATGTACTTCTTGAGATTCAACAAGATGGCATGGTTGATGGAGACTATGAGCTTACCAACAGTGACCTCAAAGCACTTCTCATGGACATGTTTGTAGGTGGCACAGATACAACTTCAGCAACAATAGAATGGGCAATGACAAGGCTTGTGAAGAATCCTGAGAGCATGAAGAAAGTTCAACAAGAAGTGAGAAGTGTTGTGGGGCTTAACAATTCATCAAAAGTGGAAGAACACCTCATCAACCAAATGCACTACCTCAAGTGTGTAGTGAAGGAGACTCTAAGGTTGCATCCACCTTGCACCGTTTTGCCTCCACGAGAGACAATGGCCTCTGTCAAGCTCAATGGCTTTGATATCCCTGAAAAAACAATGGTACTAACTAATGCATGGGCAATTCAAAGGGACCCAAAGTTGTGGGAAAAGGCAGAGGAGTTCATGCCTGAGAGATTTGAGAAGAGTGAAATTGATTTTAATGGTGATCAATGGTTTGAGTTCCTTCCATTTGGGTATGGGAGAAGGGGTTGTCCTGGTATGTTCTTTGGGGTTGCTACTGTTGACTATGTTCTTGCTACCCTTCTTTATTGGTTCGATTGGAAGCTTCCAGAAGATGTTTCATCTGCTGATGACATTGATATGGGTGAAGAATATGGACTCGTTGTCTCAAAGAAAGTACCTCTTCACCTTAAACCAATAGCACATCTTAAAGTACTTCATTATTAA 1599 0.4434 MVLIKHSIYNQIQQASLSNNTYLWLLFFAISFLFVFLFNRTRKPTTKTNMNLPPSPPKLPFIGNLLQLGTLPHRSLRTLSQTYGDIMMLQLGQRPYPTLVVSSAEISKEINKNYDLVFSNRPQNTATKILLYGATDVGFGLYGDDWRKKRKIIVLQLLSTRRVQSFGAIREEEVTETVKELMEASLKGKTVNLGKMVVSTANNIVCKCALGGTYGKEGGIQDLARRVMIYLTAFTVRDYFPALGWVDVVSGKIGRYRETFRKLDCLFDKVIEEHKMMAKNNEGGDDNKKKDLVDVLLEIQQDGMVDGDYELTNSDLKALLMDMFVGGTDTTSATIEWAMTRLVKNPESMKKVQQEVRSVVGLNNSSKVEEHLINQMHYLKCVVKETLRLHPPCTVLPPRETMASVKLNGFDIPEKTMVLTNAWAIQRDPKLWEKAEEFMPERFEKSEIDFNGDQWFEFLPFGYGRRGCPGMFFGVATVDYVLATLLYWFDWKLPEDVSSADDIDMGEEYGLVVSKKVPLHLKPIAHLKVLHY 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120842g00044 532 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 461 470 IPR017972 GO:0005506|GO:0016705
Stsc120842g00044 532 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120842g00044 532 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120842g00044 532 PRINTS E-class P450 group I signature 458 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120842g00044 532 PRINTS E-class P450 group I signature 80 99 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120842g00044 532 PRINTS E-class P450 group I signature 200 218 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120842g00044 532 PRINTS E-class P450 group I signature 468 491 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120842g00044 532 PRINTS E-class P450 group I signature 380 398 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120842g00044 532 PRINTS E-class P450 group I signature 421 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120842g00044 532 PRINTS P450 superfamily signature 381 392 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120842g00044 532 PRINTS P450 superfamily signature 459 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120842g00044 532 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120842g00044 532 Pfam Cytochrome P450 53 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120842g00044 532 CDD CYP71-like 82 519 - -
Stsc120842g00044 532 Gene3D Cytochrome P450 38 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120842g00044 532 SUPERFAMILY Cytochrome P450 53 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120842g00044 532 FunFam Cytochrome P450 83B1 39 522 - -
Stsc120842g00044 532 PANTHER CYTOCHROME P450 71B11-RELATED 34 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120842g00044 Stsc-Chr120842 267378 271553 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120842g00044 29 524 Cytochrome P450 AT3G26170 42.240 5.61e-130 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120842g00044 K20617 - gmx:100781909 620.928