Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120841g00033 ATGGAAAATGTGGTCAAGCATACAAGGAAGGTTGTGGAGATAGATCCTGTTACTAAGACTGAAGTAGTTAGGCATGAGAAAGTTTGGAATTATACCATTGCGGATATTAGTCTATTAGCCTTTGGAACTAGCTTTCCTCAGATATCGTTAGCCATCATTGATGCTATAAGAAATGTGGGGAACTTGTATGCTGGAGGTTTAGGACCCGGAACACTCGTTGGTTCTGCAGCATTTGACCTTTTCCCTATCCATGCTGTCTGTGTAGTAGTTCCAAAAGCAGGAGAACTGAAAAAGATTGCTGACATAGGAGTATGGTTGGTGGAGTTGTTTTGGTCATTTTGGGCTTATATTTGGTTATACATTATTTTGAAGGTATGGACTCCAGATGTGATTACTCTATGGGAGGCCTTGTTGACAGTACTGCAGTATGGATTACTGTTGACCCATGCTTATGCTCAAGACAAGCGCTGGCCATATATTTCTCTACCTATTGAAAGAGATGAGAGGCCTGAGGAATGGGTGCCAGAAGAGTCTCCTTATTTTGCAAAAGAAGGCCATGACAAAATGGACTTTTCTGAGATATGTCCCATGAGTGAAGAACATGGGGAGACTGTTGATATTTTCTCCATTCATTCAGTAAATCCCACTGACCAGAGATATGAAAGAGTAGCTCAAATAGATGATAACGTTGCTCAAGTTTCTGGGAAAGCTAAGGAAATGATCACAGAGGATGTTCATTTGCTTAAAATTTGGAAGCAGCAATTTGTGGATGCACTGACGTTGGAGAGCCTGGAAGCAAAAAAACTGAATAACGCCTATCTCCGCATGGGTAGAATTTTGTGGCAATTACTGCTTTTACCATGGAGGTTTCTGTTTGCTTTTGTTCCTCCATGCCATATAGCTCATGGATGGATCTCCTTCATTTGCTCTTTGCTTTTCATCAGTGGAATAGCTTACATTGTTACTAGGATCACAGATCTTATAAGTTGTGTCACAGGAATAAATGCTTATGTCATAGCGTTTACAGCACTGGCCAGTGGAACTTCGTGGCCCGATTTAGTGGCTAGCAAGATTGCTGCTGAACGTCAAATAACTGCAGACTCAGCAATTGCAAACATCACTTGCAGCAATTCAGTGAACATATATGTTGGCATTGGTGTTCCATGGCTTATTGATACCTTTTACAACTTCATAGCATATAGAGAACCTCTTCGGATCCAAGATGCAGGGGGGCTAAGCTTTTCATTGCTTGTTTTCTTCTCTACTTCCGTTGGGTGTATATCGGTTTTGGTTTTACGGCGTTTAATTTTTGGCGCGGAGCTAGGAGGACCAAGGCTCTGGGCATGGATCACTTGTGTGTACTTCATGCTTCTGTGGATTATTTTTGTTGTGCTATCATCACTCAAAGTTTCTGGGTTCATTTAG 1425 0.4154 MENVVKHTRKVVEIDPVTKTEVVRHEKVWNYTIADISLLAFGTSFPQISLAIIDAIRNVGNLYAGGLGPGTLVGSAAFDLFPIHAVCVVVPKAGELKKIADIGVWLVELFWSFWAYIWLYIILKVWTPDVITLWEALLTVLQYGLLLTHAYAQDKRWPYISLPIERDERPEEWVPEESPYFAKEGHDKMDFSEICPMSEEHGETVDIFSIHSVNPTDQRYERVAQIDDNVAQVSGKAKEMITEDVHLLKIWKQQFVDALTLESLEAKKLNNAYLRMGRILWQLLLLPWRFLFAFVPPCHIAHGWISFICSLLFISGIAYIVTRITDLISCVTGINAYVIAFTALASGTSWPDLVASKIAAERQITADSAIANITCSNSVNIYVGIGVPWLIDTFYNFIAYREPLRIQDAGGLSFSLLVFFSTSVGCISVLVLRRLIFGAELGGPRLWAWITCVYFMLLWIIFVVLSSLKVSGFI 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120841g00033 474 Gene3D - 31 167 IPR044880 -
Stsc120841g00033 474 Gene3D - 263 468 IPR044880 -
Stsc120841g00033 474 Pfam Sodium/calcium exchanger protein 303 466 IPR004837 GO:0016020|GO:0055085
Stsc120841g00033 474 Pfam Sodium/calcium exchanger protein 21 151 IPR004837 GO:0016020|GO:0055085
Stsc120841g00033 474 PANTHER SODIUM/CALCIUM EXCHANGER 242 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120841g00033 Stsc-Chr120841 210432 213753 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120841g00033 1 474 Antiporters AT2G47600 73.695 0.0 706
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120841g00033 K03452 K05849 gmx:100792839 799.66