Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120841g00014 ATGGCTGCTGAACTTGTTGGAGGAGCTTTTCTCTCCTCTTTTCTCAATGCTCTTTTTGACCGGCTCTCTGATCCTGAAATCATCCACATGATGCGAGGAAAGAAGGTTGACCAGAAGCTGCTACAAAGGCTGGAGAACATTCTGAATGCGGTTGAAGCTGTTCTGAATGATGCTGAAAAGAAACAGATCAATGACCCTGCTGTCAAGAGGTGGCTTGAAAATCTCCAAAATGCTGTCTATGATGCTGATGATTTGTTGGATGAAGTCGCCACCAAAGCTGCTACTCAGAAGGATCCACCAGGTGACTTCCTGTCTCGCTTTTTCAATCCTCAAGACAGCGAGATGGTTACTAGGATTGAAGAAATCATTGCTAGACTAGAAGATATTGCAAAACACAAAGATATCCTTCGTCTAGAAAAGATTGCAGCCAAGAACATGTCGGGGAGGCTTCCATCAACATCACTAGTTAAAAAATCTGATATATTCGTTGGAAGGGACAAAGAGAGGGATACCTTAGTCAAATTGTTGTTAGATGATGCTTACGATGGTGAATTGTCTGTGATTCCCATCATGGGCATGGGTGGGATAGGAAAAACTACTTTGGCTAAATTGGTTTATAATGATGACAAAGTGCAGCAAAAGTTTCATGTCAAGGCATGGATTTGTGATGGCGAGGAGGAATTTGATGTTCTTAAGGTGACAAAGGCTGTGATAGAGAAAACTTGTAGCACTCCTTGTTACTCAAATGATTTAGATACCGCTCAAAATCATTTGAAGAATGCGCTAGCAGGGAAGAACTTCTTGGTTGTCCTGGATGATGTGTGGAGCAGTAATCGTGAGGCTTGGGAAAGTTTTCTAACTCCTTTTGAATGTGGAAGTGAGGGAGGCAAGGTTCTTGTAACAACTCGTCTTGATACTGTTGCTTCTGTGGTGAAAACTAGACACAATCAAGCTCATAATTTGAGTTTGTTGGATGAAGAACAATGCTGGTCTGTGTTTGCAAATCGTGCATGGGATCCGACTGAATCTCGAGATCATGCAGCTTTAGAAGAAATTGGCAGAAAAATTGTTAAAAAATGTAAAGGATTACCTTTGGCAGTTCAAACCCTTGGAGGGTTATTGAGAGGGAAAGATAGTGAAAAGGATTGGAATGATGTTTTGAACAGTGAGTTTTGGGAACTTTCTGAGGAGGATAGTGGTATTCTTCCGGCGTTGCGAATAAGTTATTACCACCTCCCATCACATTTAAAACGCTGCTTTGTTTACTGTTCTTTGTATCCAAAGGACTTTGAGTTTGACAGAAATGAATTGATGCTCTTGTGGATGGCTGAGGGTCTTTTACTGCTTCCAAAGAGTGGAAAAACTTCAGAAGAAATTGGTTATGAATACTTTGATAATTTGGTTTCAAGATCATTTATTCAACCTTCTAATAATCTCAATAAAAATTCATTTGTGATGCACGATCTCATACATGATTTAGCAATATTCTATGGTGGAAAGTTCTTTTCCAGAATCTTCGAAATCAATGATGCAGCAAAGCATGATACTAAAACTCGCCACTTGTCCTGTGCTCGCCGCAAGAATCATGATGATTGGCTTCTAAAGATCACAAAAGCATGCAACAGGTTAAAACATGCGAGGACATTGTTCCAAATCAATTTGGATGAATATGGTGGATTCTCAAAGGGAGTAAGCATTCCATGTGAGTTACTAGAACAATTGAAGTGCTTACGGGTTTTGTCATTTGATTTCTTTTCGGATGATGAAAACTTGTTGCATGGTTCAATTGGTGAATTGATTCATTTGCGTTATTCGGATCTTTCATACACATCCTTGGTGACATTGCCTGAGTCATTAAGTTGCTTGTACAATTTACAAACTTTGAAGTTGAGAAACTGTAGAAATCTTAAAAAGCTTCCTACCAAGATGCAAAATCTTGTGAATTTGCGTCATCTTGATATTGAAGGCACTTCTATAGAAGATATGCCAAAAAAGATGGGCAAATTAAAAGATTTGCAATTTTTAAGTTCGTATGTGGTGGGCAAGCATGAAGACAATGGGATTGGAGAATTGGGAGAGCTAACAAATCTTCATGGGTCATTGCGTATTGATAAATTAGAGAATGTTAATAACAGTGGTGAAACATCGAATGCAAGGATGGATGAAAAAATACAGCTGAATGCTTTAGAACTGATATGGTCATCAATTGAAGAAAGTGAGGCTTGTGATTCCCAAAGTGAAAAAGATGTACTTGACAAATTACGTCCTCACAAAGACTTGAAGAGGCTAGTCATCTGGGGATATAGAGGTACAATGTTTCCAGATTATGTAGGGCAGTCTTTGTACCACAACATGACTAAGTTGTGGCTGGTGAGTTGCAAGAATTGTTGGGTGGTTCCTTCACTTGGACAATTACCGTCTCTCATGGACCTGAGACTTTTTGAATTTGATATGGTGAAGAAGATTGGTGCTGAATTCTATAAGGCTCCTGGGACTCATCATCAAGAGACACCCTTCCGATCCCTTAAAACTCTTCAATTTTATAAGATGGGTTGCTGGGAGGAATGGGAGTCATTTGAATGTGATGATGATGATCATGCACCATTTCCTCAACTTGTGTATCTTTCGATAACTGAGTGTCCAAAGTTAAGAGGAGATTTGCCCACTTTCCTTCCGTCTTTGAAAACTCTTTACATTTCAGAATGCTCAGAGCTTGGTTGTTATCTGCCAAGGGCTCCCATCATACGCCACTTAATAATAGATGGAAAACAGGAAGCAAGAATACGAGAGTTATCACTTTCCATGTTGGAGACACTTGCAGTTAATGGAGAGCAGCAGGTGGAGTATGTGTTTGATGCCATCACCCACTCCCAACCAGCCTCACTCACAGACTTATACATCTCAAACTGCTCATCAGTGGTATCATTTGCAGGGGATTCTTTGCCTCCTTCATTGCAACGGCTGTGGATCAAGGACTGCAAGAATGTAGAATTCCCAATGCAACACCAACAACATCACTCCCTACAGAGATTAGAAATATTCAACAGCTGTGATTCACTTACTTCCTTCGCATTCCCAGCGTTCCCAAAACTCAACTATATGAGAATCGCTGGACGTGAAAATTTGACATTGCTGGAGGAGCTGTCACAGTCACAATCCCTTCAACATTTGGAGGTTGAAGAATGCTCTAAGCTGGAGAACATACGGCTGCCTGCCTCTTTAAGTCATCTCAGAATCAAGAAATGCCCGTTGTTGGGTGAACGCATCCAGAGGAAGGATCCCCACATTTGGCCATCCATTTCCCACATCAAATCCATTCGAGTTGATGGGAAACAGATTCACAGTGACTCAACTTCTTAA 3360 0.4051 MAAELVGGAFLSSFLNALFDRLSDPEIIHMMRGKKVDQKLLQRLENILNAVEAVLNDAEKKQINDPAVKRWLENLQNAVYDADDLLDEVATKAATQKDPPGDFLSRFFNPQDSEMVTRIEEIIARLEDIAKHKDILRLEKIAAKNMSGRLPSTSLVKKSDIFVGRDKERDTLVKLLLDDAYDGELSVIPIMGMGGIGKTTLAKLVYNDDKVQQKFHVKAWICDGEEEFDVLKVTKAVIEKTCSTPCYSNDLDTAQNHLKNALAGKNFLVVLDDVWSSNREAWESFLTPFECGSEGGKVLVTTRLDTVASVVKTRHNQAHNLSLLDEEQCWSVFANRAWDPTESRDHAALEEIGRKIVKKCKGLPLAVQTLGGLLRGKDSEKDWNDVLNSEFWELSEEDSGILPALRISYYHLPSHLKRCFVYCSLYPKDFEFDRNELMLLWMAEGLLLLPKSGKTSEEIGYEYFDNLVSRSFIQPSNNLNKNSFVMHDLIHDLAIFYGGKFFSRIFEINDAAKHDTKTRHLSCARRKNHDDWLLKITKACNRLKHARTLFQINLDEYGGFSKGVSIPCELLEQLKCLRVLSFDFFSDDENLLHGSIGELIHLRYSDLSYTSLVTLPESLSCLYNLQTLKLRNCRNLKKLPTKMQNLVNLRHLDIEGTSIEDMPKKMGKLKDLQFLSSYVVGKHEDNGIGELGELTNLHGSLRIDKLENVNNSGETSNARMDEKIQLNALELIWSSIEESEACDSQSEKDVLDKLRPHKDLKRLVIWGYRGTMFPDYVGQSLYHNMTKLWLVSCKNCWVVPSLGQLPSLMDLRLFEFDMVKKIGAEFYKAPGTHHQETPFRSLKTLQFYKMGCWEEWESFECDDDDHAPFPQLVYLSITECPKLRGDLPTFLPSLKTLYISECSELGCYLPRAPIIRHLIIDGKQEARIRELSLSMLETLAVNGEQQVEYVFDAITHSQPASLTDLYISNCSSVVSFAGDSLPPSLQRLWIKDCKNVEFPMQHQQHHSLQRLEIFNSCDSLTSFAFPAFPKLNYMRIAGRENLTLLEELSQSQSLQHLEVEECSKLENIRLPASLSHLRIKKCPLLGERIQRKDPHIWPSISHIKSIRVDGKQIHSDSTS 1119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120841g00014 1119 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 423 IPR027417 -
Stsc120841g00014 1119 Coils Coil 41 61 - -
Stsc120841g00014 1119 Pfam NB-ARC domain 172 388 IPR002182 GO:0043531
Stsc120841g00014 1119 PANTHER DISEASE RESISTANCE PROTEIN RP 43 880 IPR044974 GO:0006952
Stsc120841g00014 1119 Gene3D Ribonuclease Inhibitor 915 1107 IPR032675 -
Stsc120841g00014 1119 PRINTS Disease resistance protein signature 889 905 - -
Stsc120841g00014 1119 PRINTS Disease resistance protein signature 187 202 - -
Stsc120841g00014 1119 PRINTS Disease resistance protein signature 261 275 - -
Stsc120841g00014 1119 PRINTS Disease resistance protein signature 360 374 - -
Stsc120841g00014 1119 Gene3D - 408 495 IPR036388 -
Stsc120841g00014 1119 Gene3D - 17 134 - -
Stsc120841g00014 1119 SUPERFAMILY L domain-like 485 904 - -
Stsc120841g00014 1119 Gene3D Ribonuclease Inhibitor 531 903 IPR032675 -
Stsc120841g00014 1119 FunFam Probable disease resistance protein At1g63360 409 496 - -
Stsc120841g00014 1119 SUPERFAMILY L domain-like 869 1088 - -
Stsc120841g00014 1119 Gene3D - 140 319 IPR027417 -
Stsc120841g00014 1119 Gene3D - 323 407 IPR042197 -
Stsc120841g00014 1119 Pfam Rx N-terminal domain 10 100 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120841g00014 Stsc-Chr120841 83591 86950 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120841g00014 184 494 WRKY Transcription Factor Family AT5G45050 26.282 2.33e-13 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120841g00014 - - ahf:112755913 1637.85