Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120840g00037 ATGTCTACCACTTTCATACTCTCTTTTTTCATCTTCACACTCTTCTTCTCCATCTTCTCCTTCCTTATCTACATATCTAGGATGAAACCATGGTGTAACTGCCAAACTTGTCGCACCTACCTCAATATGTCATGGACCACACAATTCCCAAACCTTTCCGACTGGTACACCCACCTTCTCCGCACTTCCCCCACCGGAACCATTCACCTTCACGTCCTCCAAAACACAATCACCTCCAACCCGGACAACGTCGAGCACATTCTCAAAACCAAGTTCCACAACTACCCCAAGGGGAGACCATTCTCTACTCTCCTCGGCGACCTTCTCGGCAACGGAATCTTCAACTCCGATGGTCACTCCTGGCGCTTCCAACGCAAGATGGCCAGTCTCGAGCTCGGCAGCGTCGCCATTCGTTCCTACGCCCTTGACATAGTCAACGAAGAGATCCAGACCAGACTAATTCCTCTCATGGAATCTGTTTCCGGCAAGCAAGATAGATTGTTGGACATCCAAGACGTCCTGAGAAGATTCTCTTTCGACATCATATGCAAATTCTCCTTCGGAATGGACCCGGAGTGCCTGATTCCGTCACTGCCGGAGTCCAAGCTGGCAGAGAGCTTCGACCTCGCATCGAAGCTCTCTGCAGAGAGAGCAATGTCGCCGTCGCCACTCATATGGAAGGTGAAGCGACTATTGAACATTGGTTCGGAAAAGAAGCTGAGGGAAGCGATCGCAGTGGTGGACAATGTGGCCATGGACATGATAAGGCAGAGGAGGAGGGATATGAAGACGATTGCTGTGGAGAAATCGGACTTGCTATCGCGATTCATGGGATCCATAGAAGACGACAAGTACCTGAGAGACATAGTCATAAGTTTCCTGCTGGCGGGTCGCGACACAATAGCAGCAGCGTTGACCGGGTTTTTCATTCTGCTTTCCAAGAACCCGCATGTGGAGTCAACCATACGCCAAGAGCTGGACCGGGTCATGGAGCCCCATCAGGAATTGCCCACTTTTGATCAAATGAGGGTCATGCATTACCTGAATGGAGCAGTTCACGAGAGCATGAGGCTGTTCCCTCCTGTTCAGTTTGATTCAAAGTACGCGGAAGAAGATGACGTCTTGCCAGATGGCACTCTTGTCACACGAGGGAGTCGGGTCACCTACCACCCCTATGCAATGGGTCGGATGGATACCATTTGGGGACCCGATTGGGCTGAGTTTAGACCCCAAAGATGGCTGAATGAGGATGGTGTTTTTGTTCAGCACTGCCCCTTTAAGTACCCGGTATTTCAAGCCGGGGTGAGGGTGTGTTTGGGAAAAGACTTGGCTTTGATGGAGACCAAGTCCATTGCCGCGGCGGTGCTCCGCCGTTTTGATGTCCGGGCTGTTGGGCCCAATACGGATCCCCGATTTGCTCCGGGTCTTACTGCCACTGTGCGGGGTGGGTTGCCCGTTCAAATTAGCGACAGGTGCTGA 1479 0.5172 MSTTFILSFFIFTLFFSIFSFLIYISRMKPWCNCQTCRTYLNMSWTTQFPNLSDWYTHLLRTSPTGTIHLHVLQNTITSNPDNVEHILKTKFHNYPKGRPFSTLLGDLLGNGIFNSDGHSWRFQRKMASLELGSVAIRSYALDIVNEEIQTRLIPLMESVSGKQDRLLDIQDVLRRFSFDIICKFSFGMDPECLIPSLPESKLAESFDLASKLSAERAMSPSPLIWKVKRLLNIGSEKKLREAIAVVDNVAMDMIRQRRRDMKTIAVEKSDLLSRFMGSIEDDKYLRDIVISFLLAGRDTIAAALTGFFILLSKNPHVESTIRQELDRVMEPHQELPTFDQMRVMHYLNGAVHESMRLFPPVQFDSKYAEEDDVLPDGTLVTRGSRVTYHPYAMGRMDTIWGPDWAEFRPQRWLNEDGVFVQHCPFKYPVFQAGVRVCLGKDLALMETKSIAAAVLRRFDVRAVGPNTDPRFAPGLTATVRGGLPVQISDRC 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120840g00037 492 PANTHER CYTOCHROME P450 23 485 - -
Stsc120840g00037 492 CDD CYP86A 64 484 - -
Stsc120840g00037 492 PRINTS P450 superfamily signature 296 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120840g00037 492 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120840g00037 492 PRINTS P450 superfamily signature 438 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120840g00037 492 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120840g00037 492 Gene3D Cytochrome P450 31 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120840g00037 492 SUPERFAMILY Cytochrome P450 50 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120840g00037 492 PRINTS E-class P450 group I signature 285 302 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120840g00037 492 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120840g00037 492 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120840g00037 492 PRINTS E-class P450 group I signature 305 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120840g00037 492 Pfam Cytochrome P450 64 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120840g00037 Stsc-Chr120840 244423 246139 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120840g00037 22 491 Cytochrome P450 AT2G27690 61.345 0.0 602
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120840g00037 K20624 - gmx:100813091 717.227