Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120840g00035 ATGGAGGAGGGGCTGTTACATTTTTTGGCAGTAGTACTACTACTACTTTTCTGTGGATGGAAGCTGCTCAACTCCTTCTTCCTCACACCTAAGAAACTTGAGAGGCTTCTTAGGGAACAAGGCTACCATGGCGATCCCTACACCCTCTTCCCCAACAATAACTCTTGTTCTTCTTCTAATAAGAACAAGATGACGCCAATGAGTATCTCTGACGACAAGGACATAGCTCCACGTGTCTCGTATGCAGGCGATCATGCTATCCACAAGTTTGGCAACAAGTCATTTTATTGGGAAGGTCACACACTCAAGGTGAACATCACAAACCCCGATCATATTAAGCAAGTCCTTACCAATAACACTTTCTTCAAGAAAGAGCCGCTTAAGCTCAAGCGCCTTGCCAACTTGTTGGGCTCTGGACTTCCAAATTACGAGGACCACGAATGGCTCAGACATCGCAGGATCATCAACCCCGCTTTCCATTTCGACAAATTGAAAGTTCTGACATCAACAATGGTGCAATGCTGCGATGATGTGATTAGTAAATGGGAGGAGATGGTGTCTTGTTCAGATTCAGAGGGTAAATGCGACATTGATGTATGGCCTTCCATCCAAAATTTGGCTTCTGATGTCATTTCTAGAACAGCCTTTGGAAGCAGCTACCAAGAGGGAAAAAGAATTTTTGAACTCCTTATGAAGCAAGCTACACTTATAATGAGATTAAAATACATCCACATTCCAGGATGGTGGTTACTTCCTACGAGTGTTAATAGGAGTATGATTAAAATTGATAGAGAGATACAAAAATCACTTGAAGCTATCATCAGCAAGCGAGAGAAAGCAATGAAGGATGGAGAGGAAGTTAACAAGAGTGACTTATTAGGCATACTTTTGGAATCAAACAAGAATGAAATAAAAGAAGAAAATGGATATGGAAACAGCAGCAAGAAGAAGGGAATTATTGGAATGAGTAATCGAGAGATAGTGGAAGAATGCAACACATTTTACATTGCAGGCCAAGGAACCACCGCTGATTTGATGGTTTGGACAATGGTATTGCTGAGTAGGTATCCCGAATGGCAAACTCGTGCCAGGGAGGAAGTCTTCCAAGTCTTTGGCAACCGAAAACCAGACAATGATGGATTGAATCGCCTTAAAACCGTGACAATGATCTTGAATGAGGTGTTAAGGCTATACCCACCAGGCCTCTTTTTCAGTAGAACAGTGGACAAAGATATAAAGATGGAAAACCTTTCACTACCTGCGGGAGTTAAGGTTACATTACCAATACTTTACATCCATCATGATCGTGAATTATGGGGTGATGATGCAAAGGAGTTCAAACCAGAGAGATTTTCTGAAGGAATTGCTAAAGCCACAAAGGGACGCCTCTCATATTTTCCATTTGGATGGGGTCCAAGAATATGCATTGGCCAAAACTTCTCCTTAATGGAAGCCAAGATATTTCTCACATTGCTTTTGCAAAGCTTCACATTTGAGCTCTCCCCAGCATATACACATGCTCCACTCAATTTCTTTACTCTTATACCAATGCATGGGGCCCAAATCGTCTTACGAAAATTGTAG 1584 0.4186 MEEGLLHFLAVVLLLLFCGWKLLNSFFLTPKKLERLLREQGYHGDPYTLFPNNNSCSSSNKNKMTPMSISDDKDIAPRVSYAGDHAIHKFGNKSFYWEGHTLKVNITNPDHIKQVLTNNTFFKKEPLKLKRLANLLGSGLPNYEDHEWLRHRRIINPAFHFDKLKVLTSTMVQCCDDVISKWEEMVSCSDSEGKCDIDVWPSIQNLASDVISRTAFGSSYQEGKRIFELLMKQATLIMRLKYIHIPGWWLLPTSVNRSMIKIDREIQKSLEAIISKREKAMKDGEEVNKSDLLGILLESNKNEIKEENGYGNSSKKKGIIGMSNREIVEECNTFYIAGQGTTADLMVWTMVLLSRYPEWQTRAREEVFQVFGNRKPDNDGLNRLKTVTMILNEVLRLYPPGLFFSRTVDKDIKMENLSLPAGVKVTLPILYIHHDRELWGDDAKEFKPERFSEGIAKATKGRLSYFPFGWGPRICIGQNFSLMEAKIFLTLLLQSFTFELSPAYTHAPLNFFTLIPMHGAQIVLRKL 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120840g00035 527 PRINTS P450 superfamily signature 475 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120840g00035 527 PRINTS P450 superfamily signature 337 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120840g00035 527 PRINTS P450 superfamily signature 389 400 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120840g00035 527 PRINTS P450 superfamily signature 466 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120840g00035 527 Gene3D Cytochrome P450 82 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120840g00035 527 PANTHER CYTOCHROME P450 FAMILY MEMBER 17 509 - -
Stsc120840g00035 527 Pfam Cytochrome P450 89 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120840g00035 527 SUPERFAMILY Cytochrome P450 87 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120840g00035 527 PRINTS E-class P450 group I signature 326 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120840g00035 527 PRINTS E-class P450 group I signature 429 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120840g00035 527 PRINTS E-class P450 group I signature 346 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120840g00035 527 PRINTS E-class P450 group I signature 465 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120840g00035 527 PRINTS E-class P450 group I signature 206 224 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120840g00035 527 PRINTS E-class P450 group I signature 475 498 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120840g00035 527 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 468 477 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120840g00035 Stsc-Chr120840 233279 235319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120840g00035 21 527 Cytochrome P450 AT3G14680 47.441 5.06e-164 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120840g00035 - K17873 gmx:102667924 597.43