Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120840g00013 ATGGAGTTTTGGGGTGTTGAGGTTAAGCCGGGCGATAGCGTTAAAATTGACCAGTTGGAAGTTTTTAATGCCTACATCCACATCTCTCAGGTTGCACTAGGAGAGGCCGCAAAGAATGAGAAATCCAATGATCCTGTGGTTATCTACCTCAAAGTTGGAGAGCAGAAGCTTGTTATTGGAACTCTGAACAGGGTGGAAATCCCCCAAATACCCTTGGATTTGGTTCTCGACCAAGAAGCTGAGCTTTCCCACACTGGCAAGAGTGCCAGTGTTTATTTCACTGGATACAGGGCTGATCGTGATGAGGGAGGACCTGGTGAGTTTGATTCTGATGACTTTTCAGAGAGTGATGAGGAAGAGGCTGCATTGAATGTCAAAGATAATGGAAAACTTGAAACCAAGAATGAAAAGGTAAAGATTGCTGAGCCGAAAAAGGATGTGAGTGCTGTTGCAGCAAAGAAACCCAATGTTGCTGTTCCAAAGAAAGATGAAGAGGATGAGGACTCTGATGAGGATGACTCTGATGAAGATGATGACTCTGATGATGAAGACGAATCTGGAAGTGAGATGGATGCTGATAGTGATGATGAGAGCGATGATGATGAAGAAGAGACACCTGTGAAGAAGGTGGACCAGGGCAAGAAGAGACCAAACACGCCTGCATCAAAAACCCCAGTTCCTTCTGCTAAGAAAGCAAAGAATGTGACTCCTGAAAAGTCTGGTGGCAAGAAAAATGCACATACACCAACTCCTCACCCCGCGAAGAAGGGTGGAAATCCCAACAGCGCAGGGAAGTTCCAATCACTCAAAACAGGTTCACAACAGCAGAAAAAGAGTGCAGGAAAGAAGGGTGGTCGTTGA 861 0.4553 MEFWGVEVKPGDSVKIDQLEVFNAYIHISQVALGEAAKNEKSNDPVVIYLKVGEQKLVIGTLNRVEIPQIPLDLVLDQEAELSHTGKSASVYFTGYRADRDEGGPGEFDSDDFSESDEEEAALNVKDNGKLETKNEKVKIAEPKKDVSAVAAKKPNVAVPKKDEEDEDSDEDDSDEDDDSDDEDESGSEMDADSDDESDDDEEETPVKKVDQGKKRPNTPASKTPVPSAKKAKNVTPEKSGGKKNAHTPTPHPAKKGGNPNSAGKFQSLKTGSQQQKKSAGKKGGR 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120840g00013 286 Gene3D Nucleoplasmin core domain 1 104 - -
Stsc120840g00013 286 MobiDBLite consensus disorder prediction 98 286 - -
Stsc120840g00013 286 MobiDBLite consensus disorder prediction 119 149 - -
Stsc120840g00013 286 FunFam Histone deacetylase HDT1 1 102 - -
Stsc120840g00013 286 MobiDBLite consensus disorder prediction 164 204 - -
Stsc120840g00013 286 MobiDBLite consensus disorder prediction 261 280 - -
Stsc120840g00013 286 Pfam Nucleoplasmin-like domain 3 96 IPR041232 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120840g00013 Stsc-Chr120840 91213 93473 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120840g00013 1 286 C2H2 Transcription Factor Family AT5G03740 37.282 2.86e-29 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120840g00013 - - gmx:547649 238.424