Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120839g00036 ATGTTACCAACTCATTACCAAGTTTTGCATGATGAAATTTGGTTCTCTGCTGATGATTTGCAAGAATTAGTTCATTCTCTTTCTTATGTCTACCAGAGGAGCACCACTACCATATCAATAGTTGCTCCAATTTGCTATGCTCACTTAGCAGTTGTCCAAATGGGAAAGTTTATCAAGTATGATGAACTGTCTGAGACTTCTTCCAACCATGACGGAACTACAATTTCGGCTTATAAGGACTTGAATCTTCCCCTGTTCTTTGGATTAGTTCTCCTCTTTTACATGAAATGA 291 0.378 MLPTHYQVLHDEIWFSADDLQELVHSLSYVYQRSTTTISIVAPICYAHLAVVQMGKFIKYDELSETSSNHDGTTISAYKDLNLPLFFGLVLLFYMK 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120839g00036 96 Gene3D - 1 87 IPR036397 GO:0003676
Stsc120839g00036 96 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 3 61 - -
Stsc120839g00036 96 SUPERFAMILY Ribonuclease H-like 3 51 IPR012337 -
Stsc120839g00036 96 ProSiteProfiles Piwi domain profile. 1 59 IPR003165 GO:0003676
Stsc120839g00036 96 Pfam Piwi domain 3 59 IPR003165 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120839g00036 Stsc-Chr120839 286885 287825 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120839g00036 3 73 Eukaryotic Initiation Factors Gene Family AT1G48410 45.070 3.30e-13 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120839g00036 K11593 - pop:7486850 123.25