Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc120839g00031 | ATGGCAGTGGATCTGGTAGGGGTTCCGCGGGTGAGGATGGAACAACAAGAACAAGTTGCAATTCAAGAAGCTGCTTCCGCTGGTTTGAAGAGCATGGAGCATCTCATACGCCTCCTCTCTTCCCAATCTCATTCTCCTTCTCCTTCTACTTCCTCTTCATCTCTCCCCAACGCGAACAATGATAACAACCTCAACTGCTCACAACTAACCGACTTTACAGTTTCCAAGTTCAAGCAAGTCATCAACCTCCTTAACCGCACCGGCCACGCCCGATTCCGCCGCGCTCCGCCACTAAACCACCCTAACCCTAACCCTCCACCTCAGCCTCAGTCCCAGCCTGGAACCAGCACCACCACCGGCTTGACGCTAGATTTCGCCAAGCCAACCATTCTGAACTCCAAGCCAGCCGTCACCAAGGATGTCGATCAAGACATGGAACTCAGTATCTCCCCTCCGGTTTCCACCACCACTTCTTCCACCTTCATGTCCTCCATCACCGGCGACGCTAGCGTCTCCGACGGCAAGATTGGCCCCTTCCTTACCCTTCCAGCTCCCGCGCCCGCTCCGGTTCCCTCCGGCAAACCTCCCCTGTCTTCTTCTCACCGAAAAAGGTGCCATGACGCAACCCTCTCCGGAAAAGCCTCCTCCTCTGCGCACTGCCATTGCTCCAAAAGAAGGAAATCACGTGTGAAACGAACGATCCGTGTGCCGGCGATAAGCTCGAAGATCGCCGATATCCCGCCTGATGAATTCTCTGGCTACTACAGGTGCAGCACCGTGAGAGGGTGTCCGGCCCGGAAGCATGTGGAGAGAGCGCAAGACGATCCGAAGATGCTAATAGTGACGTACGAAGGAGAGCACCGTCACAATCCGCAGCCACACTTGCCGGAAACTGCCGTCACTCCCGCCGTCACCTCTGCTGGTGGTTTTAGCCTCCGATCATGTTGA | 948 | 0.557 | MAVDLVGVPRVRMEQQEQVAIQEAASAGLKSMEHLIRLLSSQSHSPSPSTSSSSLPNANNDNNLNCSQLTDFTVSKFKQVINLLNRTGHARFRRAPPLNHPNPNPPPQPQSQPGTSTTTGLTLDFAKPTILNSKPAVTKDVDQDMELSISPPVSTTTSSTFMSSITGDASVSDGKIGPFLTLPAPAPAPVPSGKPPLSSSHRKRCHDATLSGKASSSAHCHCSKRRKSRVKRTIRVPAISSKIADIPPDEFSGYYRCSTVRGCPARKHVERAQDDPKMLIVTYEGEHRHNPQPHLPETAVTPAVTSAGGFSLRSC | 315 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc120839g00031 | 315 | SMART | WRKY_cls | 247 | 291 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Stsc120839g00031 | 315 | Gene3D | WRKY domain | 211 | 292 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Stsc120839g00031 | 315 | MobiDBLite | consensus disorder prediction | 92 | 121 | - | - | |
Stsc120839g00031 | 315 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 253 | 294 | IPR044810 | GO:0003700 | |
Stsc120839g00031 | 315 | MobiDBLite | consensus disorder prediction | 184 | 203 | - | - | |
Stsc120839g00031 | 315 | ProSiteProfiles | WRKY domain profile. | 253 | 292 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Stsc120839g00031 | 315 | Pfam | WRKY DNA -binding domain | 253 | 289 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Stsc120839g00031 | 315 | MobiDBLite | consensus disorder prediction | 40 | 62 | - | - | |
Stsc120839g00031 | 315 | SUPERFAMILY | WRKY DNA-binding domain | 253 | 291 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Stsc120839g00031 | 315 | MobiDBLite | consensus disorder prediction | 98 | 112 | - | - | |
Stsc120839g00031 | 315 | Pfam | Plant zinc cluster domain | 202 | 245 | IPR018872 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc120839g00031 | Stsc-Chr120839 | 254731 | 256181 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc120839g00031 | 1 | 305 | WRKY Transcription Factor Family | AT2G24570 | 46.491 | 6.46e-81 | 246 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Stsc120839g00031 | WRKY | 9.2e-13 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc120839g00031 | - | - | gmx:732587 | 315.079 |