Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120838g00031 ATGGATGGAGATTCAGTGAAGTTAATAGGATTTTGGGCTAGTCCACCTGTTCTAAGGGTGAAGTGGGCATTAGCACTCAAGGGAATAGAGTACCAATATGTGGAAGAAGATCTCAGCAACAAAAGTGACATGCTCCTTAACTATAACCCTGTCTACAAGAAGGTTCCTGTTCTTGTGCACCAGGGTAAGCCCCTTGCTGAATCACTTCTCATTCTTGAGTATATTGATGAGACTTGGAAGCAAAATCCTCTTCTTCCACATTCTCCTTATGAAAGAGCCCATGCAAGATTCTGGTCCAAATTCGTCGATGACAAGTGCGTGCCGACGGTTATAGCGGCGTTTTCCAAGGGAGGAGAAGAGCAACAGAAGGCGGCGGAAGAAGCTCGAGAGAATCTGAAGATGCTTGAGGTTGGACTCGAGGGAAAGCGATTCTTTGGAGGTGATAAGATTGGCTTTGTAGACATTGCTATTGGGTGGCTCCCATACTGGATTGGAATAGTGGAGGAAATTGTTGGGATGAACCTTATTGATGCAGATTCGATGCCTAAGCTTAATTCATGGTTCCATGCATTTCTTGACATTCCAATCATCAAAGAATGCATGCCTCCTCATGATAAATTGCTCAATCACACCAAGGCATTCCTTCAAGTGTTGACTTCATCATCATCCCCTTAA 675 0.4415 MDGDSVKLIGFWASPPVLRVKWALALKGIEYQYVEEDLSNKSDMLLNYNPVYKKVPVLVHQGKPLAESLLILEYIDETWKQNPLLPHSPYERAHARFWSKFVDDKCVPTVIAAFSKGGEEQQKAAEEARENLKMLEVGLEGKRFFGGDKIGFVDIAIGWLPYWIGIVEEIVGMNLIDADSMPKLNSWFHAFLDIPIIKECMPPHDKLLNHTKAFLQVLTSSSSP 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120838g00031 224 SFLD Main.3: Omega- and Tau-like 3 221 IPR045073 -
Stsc120838g00031 224 Pfam Glutathione S-transferase, C-terminal domain 110 193 IPR004046 -
Stsc120838g00031 224 Gene3D Glutaredoxin 1 84 - -
Stsc120838g00031 224 CDD GST_C_Tau 89 214 IPR045074 GO:0004364|GO:0006749
Stsc120838g00031 224 FunFam Tau class glutathione S-transferase 1 87 - -
Stsc120838g00031 224 Pfam Glutathione S-transferase, N-terminal domain 6 77 IPR004045 -
Stsc120838g00031 224 CDD GST_N_Tau 6 79 - -
Stsc120838g00031 224 SUPERFAMILY Thioredoxin-like 5 107 IPR036249 -
Stsc120838g00031 224 SUPERFAMILY GST C-terminal domain-like 77 217 IPR036282 -
Stsc120838g00031 224 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 214 IPR010987 -
Stsc120838g00031 224 SFLD Glutathione Transferase (cytosolic) 3 221 IPR040079 -
Stsc120838g00031 224 Gene3D - 85 222 - -
Stsc120838g00031 224 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Stsc120838g00031 224 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 9 208 IPR045073 -
Stsc120838g00031 224 FunFam Tau class glutathione S-transferase 85 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120838g00031 Stsc-Chr120838 238397 239559 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120838g00031 2 223 Glutathione S-transferase Gene Family AT2G29420 45.946 2.17e-74 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120838g00031 K00799 - gmx:100813267 331.257