Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120837g00056 ATGATGCATGATCAGAGAAAAAAGTCCTCTGTAGATGTAGACTTCTTTACTGAGTATGGTGAAGGGAGTAGATACAGAATAGAGGAAGTAATTGGCAAAGGAAGTTATGGTGTTGTTTGCTCTGCATATGATACACACACTGGAGAAAAGGTTGCAATAAAGAAAATAAATGATATATTTGAACATGTCTCTGATGCCACTCGCATTCTTCGGGAGATCAAGCTTCTTAGGCTCTTACGCCATCCTGATATTGTGGAGATTAAGCATATTTTGTTACCTCCTTCTAGAAGGGAATTCAAGGATATATATGTTGTTTTTGAACTAATGGAATCTGATTTACATCAGGTCATCAAAGCAAATGATGATTTAACTCGAGAACATTACCAGTTTTTTCTTTATCAGCTTCTTCGAGGCCTGAAGTATATACACACAGCAAATGTTTTTCACCGAGATCTAAAGCCAAAAAACATTTTAGCAAATGCCGACTGCAAATTGAAGATTTGTGATTTCGGTCTTGCTAGAGTGGCTTTCAATGATACACCAACTGCTATATTCTGGACAGATTATGTTGCTACAAGGTGGTATAGAGCTCCTGAGTTGTGTGGATCCTTTTTCTCGAAGTATACACCAGCAATAGATATATGGAGTATTGGCTGCATTTTTGCCGAACTATTAACAGGAAAACCTCTTTTCCCGGGGAAGAATGTTGTCCATCAATTGGACCTAATGACTGATTTTCTTGGAACACCATCTCCTGAAGCCATTGCTAGGGTAAGGAATGAGAAAGCTCGGAGATACTTGAGCAGCATGCGTAGGAAGAAACCAGTTCCGTTCTCCCATAAGTTTCCTAATGCAGACCCCCTTGCCCTTCGTTTGTTAGAAAGAATGCTGGCATTTGAACCTAAGGATCGACCTACTGCTGATGAGGCTCTAGCTGATCCATATTTCAAAGGCTTGGCCAAGGTTGAGAGAGAGCCTTCTGCTCAGCCAGTTACCAAGATGGAATTTGAATTTGAGAGACGCAGGATAACAAAGGAAGATGTTCGAGAACTCATATACCGAGAGGCTTTGGAATACCATCCAAAAATGTTAAAGGAACATCTAGAGGGAGCAGAGCCAACAGGTTTCATGTATCCGAGTGCTGTTGACCACTTTAAGAAGCAATTTGCATATCTCGAGGAGCATTATGGAAAAGGTGGAACTGTTACTCCACCTGAAAGGCAACATGCATCATTACCCAGGCCATGTGTATTATATTCAGATAAGTCAAGACCGAATGTAGCAGAAGTTGCAGAAGATCTCTCCAAGTGCAACATCAAAGAAAATGAGAAGCCAGCCATAGACAGGAATGGGGTTATCCCTTTGACCAAGCCTCCTTTGCATGCTCCTCAAAATATTCAAGGCATAGCTGCTCGGCCTGCGAGAGTTGCTGGTTCAGCGTTGAATTACAACAACTGTGGAGTAGCAGTGACAGCAGAGGCTGCTCAGCGGAGGATGGTTAGAAATCCAGCTGTATCGACACAATATGCTGCTTCGAGCTGTTCATATCCTAGAAGAAACCCGAGCTGTAAAACTGAAAGACCAGAAGACAATGGCATTGAAGGTTCCAACGGGCTTCAACCGAAGCCTCAATACATGGCACGAAAAGTTGCTGCCGCTCAAGGTGGAGTTGGTGGTCATTGGTAG 1686 0.4247 MMHDQRKKSSVDVDFFTEYGEGSRYRIEEVIGKGSYGVVCSAYDTHTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDLMTDFLGTPSPEAIARVRNEKARRYLSSMRRKKPVPFSHKFPNADPLALRLLERMLAFEPKDRPTADEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYREALEYHPKMLKEHLEGAEPTGFMYPSAVDHFKKQFAYLEEHYGKGGTVTPPERQHASLPRPCVLYSDKSRPNVAEVAEDLSKCNIKENEKPAIDRNGVIPLTKPPLHAPQNIQGIAARPARVAGSALNYNNCGVAVTAEAAQRRMVRNPAVSTQYAASSCSYPRRNPSCKTERPEDNGIEGSNGLQPKPQYMARKVAAAQGGVGGHW 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120837g00056 561 MobiDBLite consensus disorder prediction 516 543 - -
Stsc120837g00056 561 Gene3D Phosphorylase Kinase; domain 1 40 361 - -
Stsc120837g00056 561 SUPERFAMILY Protein kinase-like (PK-like) 22 320 IPR011009 -
Stsc120837g00056 561 FunFam Mitogen-activated protein kinase 111 339 - -
Stsc120837g00056 561 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Stsc120837g00056 561 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 24 360 - -
Stsc120837g00056 561 FunFam Mitogen-activated protein kinase 15 118 - -
Stsc120837g00056 561 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc120837g00056 561 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc120837g00056 561 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc120837g00056 561 CDD STKc_TDY_MAPK 24 361 - -
Stsc120837g00056 561 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Stsc120837g00056 561 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120837g00056 Stsc-Chr120837 307335 311183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120837g00056 1 561 MAP Kinase Gene Family AT5G19010 79.058 0.0 923
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Stsc120837g00056 Pkinase 1.7e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120837g00056 - - qsa:O6P43_021642 1027.7