Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120837g00041 ATGGCAGCAATAAACCAAACCATTTTCAAGGAAGTGAGAGTGATAGAGTCGAGATCGGAATCCTCTATCTATGAAATTTGTCTCCATATGCCACCCCGGATACTGTCAGATGGCATATGGGCCGACGAAAAAACCGGCCACTCTCCGTTGGAGTCGAGTTTGACATTGTTAGAGATGCAGATTCTCGTCATTTTCAGCCTAATCCATTGCTTTCATTTCGTCCTCAAGCGCTTCTGGTTCCCCTACTTCGTTTCGCAAGTATTGGTTGGCTTTGTTTTAGGCCCTTCGCTGAACATAGATTGGTTGAACAAATACAAAATGAAGATCTTTCCTTATGGAACTGAAGACATATTGGGGCTAATTTCATTATTCGGATACACATTCTACATGTTTCTGAATTCTGTGCAAATGGATTTCAGCATGATCTTAAGAAGTGGTAAGAAACCTTGGGCAATGGCAGTTGCTGCTGTGGCTGGACCTCTGGCCATATGCTTGATCATAACTTGGGTCACAAGAAATGTCTGGAAAGAAGTCGCCGAACCGGATCAAACACTGAGTTTGGTTGTGATTACACAAGCTGGTTGCTCCTTTGTTGTCATAGCTTCATGCCTATCTGAACTAGACATCTTGAACTCTGAACTCGGCCGAATTGCATTGACAACCGCGCTCTCCAGCGATTTCCTTACCGCTGTAATGAATTCCCTAAGCATTGTCTTCACCAAAACCCAAGCTGAGAAACATGATGCAGGAGAAGTGGTTAAGGGCATGGCAGTGTATGCAGCTATTCTAATCCTAGTCCCTCTCATCGGCCGGCCGACAATGAAGTGGGTGGCCAGGAACACCCCAGAAGGAAGGCCTGTGAGGAAAATATACACCTTTGTGATGGTCCTCTCAGCTCTCATCATAGGGTGTTTTTCAATACAAGCCAACCTGCCCATCATATTTGGAATTGTAATGCTAGGGTTCGTCATGCCGGAAGGTCCTCCATTAGGATCTGAACTAGTCAAGCAATTTGAGTTGATCAATGTATGGTTCTTTCTGCCACTCTTCGTGACCTCCGGGGCCATGAAGGTGGATCTTAACACAATAGGTGATGACCCTTCCATGGCATTGGCTACAGCAGCAATAATCTTGATGACTTTGAATAGTTCAACAGTTGCTACACTGTTTGTATCTGCATTGATTCTGGGAAGCACTGCTTATATTGGTATCAAGTCCTTGTATGATCCTTCAAGGAAATATGCAGGGTTTGAAAAGAGGAACATTTTGCATTTGAAACCTAATTCAGATCTTAGGATTGTTGCATGCATCCAAAAACCACATCATGTGAGTAGCATCAAGAATATGTTGAACCTTTGTTGTCCAACTTCAACTAGTCCTCTTGAGGTGGAAGTGCTGCACCTCATTGAGTTAGTTGGGAGTGCCACGCCGATCTTCATCTCGCACCAGCTCCAGGAATCGGCCAGCACCAGTCACAACTACTCCGGGGATATCATGGTAGCCTTTGACCTCTTCAAGCATGACAATGCCAGCACAGTAAAAGTGAGCACCTACACTGCCATATCGCCGCAGCGCCTTATGTACGAAGATATCTGCCATCTCGCCCTGGACAAGGTTGCATCCCTCATCCTCCTTCCGTTTCATATCAGATGGGCCGACGACGGTTCTGTTGATTCGACAGAGGAGAGAATTCGGACCTTGAACAACAAGGTGCTCGAAAAAGCACCATGCTCAGTTGGGATTCTTGTGAATAAAGGGTCTTGTGACAATGCATCAAAGACCATAGCCATGATCTTCTTGGGTGGTTCAGATGATAGAGAAGCATTGTGCCTTGCAAAAAGGGCAATCACAGAATCTCATTACAAAATGGTTGTGTACCATTTGGTTGGAACAAAGAATGAGTCCACAAATTGGGACATTATGCTTGATGAAGAGGTGCTCAAGAGTGTGAAGGGACTTTATGGAACTGTCACCAATGTTGCATATGAAAGGATGGTAATTGAGGACCCTTCACAAACCCCAAGATTCATTCAAACTATAGCTGCTGTGCATGATTACATCATAGTTGGGAGACGCCATAGGGTCAAATCATCTCTTACAACAGCGCTTGAGAATTGGACTGAGTTCTCAGAGTTAGGTGCAATTGGAGATTTGCTTGCATCACCAGATACCAATTCTAAAGCTTCAATTTTAGTTGTGCAGCAACAGAAAATGCCACAGCATAAGGCATAG 2232 0.4458 MAAINQTIFKEVRVIESRSESSIYEICLHMPPRILSDGIWADEKTGHSPLESSLTLLEMQILVIFSLIHCFHFVLKRFWFPYFVSQVLVGFVLGPSLNIDWLNKYKMKIFPYGTEDILGLISLFGYTFYMFLNSVQMDFSMILRSGKKPWAMAVAAVAGPLAICLIITWVTRNVWKEVAEPDQTLSLVVITQAGCSFVVIASCLSELDILNSELGRIALTTALSSDFLTAVMNSLSIVFTKTQAEKHDAGEVVKGMAVYAAILILVPLIGRPTMKWVARNTPEGRPVRKIYTFVMVLSALIIGCFSIQANLPIIFGIVMLGFVMPEGPPLGSELVKQFELINVWFFLPLFVTSGAMKVDLNTIGDDPSMALATAAIILMTLNSSTVATLFVSALILGSTAYIGIKSLYDPSRKYAGFEKRNILHLKPNSDLRIVACIQKPHHVSSIKNMLNLCCPTSTSPLEVEVLHLIELVGSATPIFISHQLQESASTSHNYSGDIMVAFDLFKHDNASTVKVSTYTAISPQRLMYEDICHLALDKVASLILLPFHIRWADDGSVDSTEERIRTLNNKVLEKAPCSVGILVNKGSCDNASKTIAMIFLGGSDDREALCLAKRAITESHYKMVVYHLVGTKNESTNWDIMLDEEVLKSVKGLYGTVTNVAYERMVIEDPSQTPRFIQTIAAVHDYIIVGRRHRVKSSLTTALENWTEFSELGAIGDLLASPDTNSKASILVVQQQKMPQHKA 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120837g00041 743 Gene3D - 56 404 IPR038770 -
Stsc120837g00041 743 Pfam Sodium/hydrogen exchanger family 62 395 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Stsc120837g00041 743 PANTHER CATION/H + ANTIPORTER 379 737 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120837g00041 Stsc-Chr120837 220668 223263 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120837g00041 26 733 Antiporter Super Family AT3G44900 34.048 8.56e-137 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120837g00041 K26731 - gmx:100778180 786.563