Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120837g00021 ATGGCGATTGCAGCCCCAGGGCAACTGAACGTGAACGAATCCCCTTCTTGGGGATCCAGAAGCGTCGATTGCTTCGAGAAGTTGGAGCAAATTGGCGAAGGCACATACGGTCAAGTTTACATGGCTAAAGAGATTAAAACTGGCGAAATCGTTGCTCTGAAGAAAATTCGAATGGACAATGAGAGAGAAGGGTTTCCTATAACTGCTATACGAGAAATCAAAATTCTTAAGAAACTACACCATGAAAATGTGATCAAGCTCAAGGAAATTGTCACTTCTCCAGGCCCTGAGAAAGATGAACAAGGGAGGCCAGATGGTAACAAATATAAAGGGGGCATCTATATGGTCTTTGAATACATGGATCATGATTTGACTGGTCTTGCTGATCGTCCTGGGATGAGATTTACAGTTCCACAAATTAAGTGTTACATGAGACAGCTGTTGACGGGCCTTCACTATTGTCATGTAAATCAAGTACTTCATCGTGATATTAAAGGAAATCTGAAGCTTGCAGATTTTGGACTGGCACGGTCATTTTCTAATGATCACAATGCAAATCTTACAAATCGTGTCATTACGTTATGGTACAGACCCCCTGAGTTGCTGCTAGGGACAACAAAGTACGGGCCAGCTGTAGATATGTGGTCTGTGGGGTGCATTTTTGCTGAACTTCTTCATGGGAAACCTATCTTTCCTGGAAAAGATGAGCCTGAACAACTGAATAAAATATTTGAGCTGTGTGGAGCACCGGATGAGGTGAACTGGCCTGGGGTTTCCAAGACTCCTTGGTATAATCAATTTAAACCAACAAGGCCAATGAAACGACGGCTGAGAGAAGTTTTCAGGCATTTTGATCGTCATGCTCTGGAATTGTTGGAGAGGATGCTGACACTTGATCCAGCTCAGAGAATTACTGCGAAGGATGCTCTTGATGCTGAGTATTTCTGGACTGATCCATTGCCATGTGACCCAAAGAGTTTACCCAAGTATGAGTCATCACATGAGTTTCAGACAAAGAAAAAGCGTCAGCAACAACGGCAAAATGAAGAAATGGCCAAGCGCCAGAAAATGCAGCATCCCCAGCAGCACACGCGTCTCCCACCCATTCAACAGGCAGGGCAACATGCACAAATGCGATCAGGACCTAACCAAAATATACATGGCTCTCAACCCCAAGTTGCTGCGGGACCCAGTCACCATTATGGGAAGCCTCGAGGTCCATCTGGTGGGCCAGGAAGATATCCACAAAGCGGGAACCCTGGTGGAGGATACAATCACCCTAATCGTGGAGGTCAAGGAGGGGGTGGATATGGCAGCGGGCCTTATCCTCCTCAAGGGCGAGGGGCACCTTACGGTTCCAGCGGTATGCCTGGTGGTGGTCCTCGCGGAGGAGGTGGTAGTGGCTATGGAGTCGGAGCCCCAACGTATCCCCAGCAAGGTGGTCCATACGGTGGATCTGGCACTGGTCGTGGCTCAAACATGATGGGTGGAAACCGCAATCAACAATACGGATGGCAGCAATGA 1524 0.4744 MAIAAPGQLNVNESPSWGSRSVDCFEKLEQIGEGTYGQVYMAKEIKTGEIVALKKIRMDNEREGFPITAIREIKILKKLHHENVIKLKEIVTSPGPEKDEQGRPDGNKYKGGIYMVFEYMDHDLTGLADRPGMRFTVPQIKCYMRQLLTGLHYCHVNQVLHRDIKGNLKLADFGLARSFSNDHNANLTNRVITLWYRPPELLLGTTKYGPAVDMWSVGCIFAELLHGKPIFPGKDEPEQLNKIFELCGAPDEVNWPGVSKTPWYNQFKPTRPMKRRLREVFRHFDRHALELLERMLTLDPAQRITAKDALDAEYFWTDPLPCDPKSLPKYESSHEFQTKKKRQQQRQNEEMAKRQKMQHPQQHTRLPPIQQAGQHAQMRSGPNQNIHGSQPQVAAGPSHHYGKPRGPSGGPGRYPQSGNPGGGYNHPNRGGQGGGGYGSGPYPPQGRGAPYGSSGMPGGGPRGGGGSGYGVGAPTYPQQGGPYGGSGTGRGSNMMGGNRNQQYGWQQ 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120837g00021 507 MobiDBLite consensus disorder prediction 328 357 - -
Stsc120837g00021 507 FunFam Cyclin-dependent kinase C-2 122 355 - -
Stsc120837g00021 507 MobiDBLite consensus disorder prediction 326 507 - -
Stsc120837g00021 507 FunFam Cyclin-dependent kinase C-2 12 121 - -
Stsc120837g00021 507 CDD STKc_CDK9_like 25 315 - -
Stsc120837g00021 507 MobiDBLite consensus disorder prediction 361 392 - -
Stsc120837g00021 507 Gene3D Transferase(Phosphotransferase) domain 1 122 355 - -
Stsc120837g00021 507 PANTHER CELL DIVISION PROTEIN KINASE 23 321 - -
Stsc120837g00021 507 Gene3D Phosphorylase Kinase; domain 1 12 121 - -
Stsc120837g00021 507 SUPERFAMILY Protein kinase-like (PK-like) 19 323 IPR011009 -
Stsc120837g00021 507 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Stsc120837g00021 507 ProSiteProfiles Protein kinase domain profile. 25 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc120837g00021 507 MobiDBLite consensus disorder prediction 481 507 - -
Stsc120837g00021 507 Pfam Protein kinase domain 25 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120837g00021 Stsc-Chr120837 127913 131861 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120837g00021 1 507 Core Cell Cycle Gene Families AT5G10270 77.011 0.0 770
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Stsc120837g00021 Pkinase 6.3e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120837g00021 K08819 - gmx:100793565 851.277