Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120837g00003 ATGGTGATGCTCATCATGATTTCAATGATGATGGTAAACATGGCAAGATCTGAAATGCACTTAGTTGGAGGAAACAAGTTTAGTTGGGCTCCTAATGTTAATTTGACACAATGGTCAATGCATGAACATTTTCATGTGCATGACTGGCTATACTTTGGATATGATAGGCACATGTACAATGTGTTGGAGGTGAACAAGACAAGCTATGAAAACTGCATAGACAAAGATTTCGTGAAGAACATAACAAAGGGAGGTGGAAGAGATGTTTTTGAACTGAATGAGGTGAAGACCTATTACTTCTTAAGTTCAGGTGGTTTCTGTTGGAATGGATTGAAGGTTGCAATTAATGTTGAAGATTTTGCAGCACCAGCTCCATCACCTGTTTCACCAAAAAAATCTTCATCTTGTACCATTGGTGTCAACAAAAATCTTGTGATTCTCTTAATCTTGATGTGGGGCATCATCTTCAAATTGCAATAG 480 0.3771 MVMLIMISMMMVNMARSEMHLVGGNKFSWAPNVNLTQWSMHEHFHVHDWLYFGYDRHMYNVLEVNKTSYENCIDKDFVKNITKGGGRDVFELNEVKTYYFLSSGGFCWNGLKVAINVEDFAAPAPSPVSPKKSSSCTIGVNKNLVILLILMWGIIFKLQ 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120837g00003 159 ProSiteProfiles Phytocyanin domain profile. 18 119 IPR003245 GO:0009055
Stsc120837g00003 159 SUPERFAMILY Cupredoxins 18 117 IPR008972 -
Stsc120837g00003 159 FunFam Lamin-like protein 16 120 - -
Stsc120837g00003 159 Pfam Plastocyanin-like domain 29 110 IPR003245 GO:0009055
Stsc120837g00003 159 Gene3D - 17 122 IPR008972 -
Stsc120837g00003 159 PANTHER BLUE COPPER PROTEIN 19 126 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120837g00003 Stsc-Chr120837 14052 15114 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120837g00003 1 153 Phytocyanin Superfamily AT2G27035 40.260 1.77e-41 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120837g00003 - - gmx:100812113 195.282