Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120836g00042 ATGGAGTTTGTGATGAGAGCTCTCCCCCTATTGTTTGTTCTCTTATTTGCTGTGTCAACCACCCAAGCCTTCAAATTCAACGTTGGTGGAAGCGCAGGGTGGGTTCCAAACCCTTCCCAGAGTTACAATCAATGGGCTGGGAACAACAGGTTCCAAATCAATGACACTCTAGTTTTCAAATACAAGAAGGGTTCAGACTCAGTGCTACAAGTGAAGAAAGAAGACTACGAAAAGTGCAACAAATCAAACCCAATAAAGAAATTCACCGACGGTAACACCGAATTCACCTTCGATCATTCAGGTCCATTCTACTTCATCAGTGGCCAAGACGATAACTGTAACAATAAAGCTCAGAAACTAATCGTCGTTGTCTTAGCGCCACGTGGCACTACACCAACACCACCAACACCATCTTCACCAAAATCACCCTCACCAGCACCTTCATCTGGATCGCCGCCTGTTCCGGCACCGACACCAGCACCAACACCCGCCGGAAACTCTCCGGCTCCTTCCGTTTCACCTCCTAGCCCACCTCCGGCGACTTCACCGGCTCCGGCGGGGAACTCACCGTCACCATCACCGTCATCAGCTCCTGTAAGTGGACCTCCGGCCCCAACCCCGGCAGGTGCAACGCCTTCTCCTTCAGCTGGATCGCCGGGTCCGGCGACTGCACCTCCGCCTCCGACTACGGCGACACCACCGGGAGGTGCAGCTCCTGGAGCGGCTAGTCCGTCTGGTACAAATGAAACGGCTCCGGCGCCGGGAAAACAAGGAAATAAAGCTTCGGTATCGAGTCCATCGAAATTCTTGGTGTATTCGATTACCATTGTTGCTGCTGCTGTGTTCTTCCCTTGA 855 0.5251 MEFVMRALPLLFVLLFAVSTTQAFKFNVGGSAGWVPNPSQSYNQWAGNNRFQINDTLVFKYKKGSDSVLQVKKEDYEKCNKSNPIKKFTDGNTEFTFDHSGPFYFISGQDDNCNNKAQKLIVVVLAPRGTTPTPPTPSSPKSPSPAPSSGSPPVPAPTPAPTPAGNSPAPSVSPPSPPPATSPAPAGNSPSPSPSSAPVSGPPAPTPAGATPSPSAGSPGPATAPPPPTTATPPGGAAPGAASPSGTNETAPAPGKQGNKASVSSPSKFLVYSITIVAAAVFFP 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120836g00042 284 MobiDBLite consensus disorder prediction 243 266 - -
Stsc120836g00042 284 Pfam Plastocyanin-like domain 34 115 IPR003245 GO:0009055
Stsc120836g00042 284 MobiDBLite consensus disorder prediction 128 266 - -
Stsc120836g00042 284 SUPERFAMILY Cupredoxins 23 125 IPR008972 -
Stsc120836g00042 284 ProSiteProfiles Phytocyanin domain profile. 24 126 IPR003245 GO:0009055
Stsc120836g00042 284 FunFam Early nodulin-like protein 1 23 129 - -
Stsc120836g00042 284 PANTHER BLUE COPPER PROTEIN 24 178 IPR039391 GO:0009055
Stsc120836g00042 284 Gene3D - 22 128 IPR008972 -
Stsc120836g00042 284 CDD OsENODL1_like 24 125 IPR041846 -
Stsc120836g00042 284 MobiDBLite consensus disorder prediction 130 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120836g00042 Stsc-Chr120836 319711 321108 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120836g00042 1 211 Phytocyanin Superfamily AT5G53870 46.296 4.77e-52 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120836g00042 - - gmx:100795901 186.037