Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120836g00029 ATGGCTGCAAGAGAAATCCTCCATAAGATGAAGGAAAAAGTTGGGCTGCGCTCATCGGAACCTGATTCGGGGAAAGGAAAGAGCAAGATGTCAAGGCGTGTAACTCATGGATATCACTTAGTAAAGGGAAGATCATACCATGCCATGGAGGATTTTGTTGTTGCTGAATTTAAGCAAGTTGATAGCAATGAACTTGGTTTGTTTGCGATATTCGATGGTCATGCCGGTCACAATGTGCCTAATTACTTGCGGTCTCACTTGTTTGAAAATATCTTAAAAGAGCCTGATTTCTGGAAAGATCCTGAAAATGCTGTCAGGAGAGCCTATAGTGTTACCGACTCTAGCATTTTGGAGAAATCAGGTGAATTGGGTAGAGGAGGTTCAACAGCCGTTACTGCGATATTGATGAACTGTCAGAAGTTAGTCATAGCTAACATCGGTGATTCTCGGGCCGTCTTATGCAAGAAAGGCCTAGCCAAACAACTTTCAGAGGATCATGAGCCACACACAGAAAGTGAAGATATAAAGAATAGAGGTGGTTTTGTATCAAAATTTCCAGGTGACGTCCCAAGGGTTGATGGACGGTTGGCGGTATCAAGGGCATTTGGCGACAAAAGTCTGAAGAAACACTTGAGTTCAGAACCACATGTGACAGTTGAGCTTGTACAAGATGATGTAGAATTCCTCATATTAGCAAGTGATGGATTATGGAAGGTAATGTCAAATCAAGAAGCAGTTAATACCATCAAAGACATAAAAGACGCTCGGGCTTCGGCGAAACGCCTCACCGAAGAAGCACTTAACAGGAAAAGCACAGATGATATATCCTGCATTGTTGTGAAATTTCAGTAA 852 0.4237 MAAREILHKMKEKVGLRSSEPDSGKGKSKMSRRVTHGYHLVKGRSYHAMEDFVVAEFKQVDSNELGLFAIFDGHAGHNVPNYLRSHLFENILKEPDFWKDPENAVRRAYSVTDSSILEKSGELGRGGSTAVTAILMNCQKLVIANIGDSRAVLCKKGLAKQLSEDHEPHTESEDIKNRGGFVSKFPGDVPRVDGRLAVSRAFGDKSLKKHLSSEPHVTVELVQDDVEFLILASDGLWKVMSNQEAVNTIKDIKDARASAKRLTEEALNRKSTDDISCIVVKFQ 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120836g00029 283 Gene3D - 30 283 IPR036457 -
Stsc120836g00029 283 MobiDBLite consensus disorder prediction 12 29 - -
Stsc120836g00029 283 ProSitePatterns PPM-type phosphatase domain signature. 67 75 IPR000222 GO:0043169
Stsc120836g00029 283 ProSiteProfiles PPM-type phosphatase domain profile. 35 282 IPR001932 -
Stsc120836g00029 283 MobiDBLite consensus disorder prediction 12 32 - -
Stsc120836g00029 283 Pfam Protein phosphatase 2C 47 275 IPR001932 -
Stsc120836g00029 283 CDD PP2Cc 36 282 IPR001932 -
Stsc120836g00029 283 PANTHER PROTEIN PHOSPHATASE 26 282 IPR015655 GO:0004722|GO:0006470
Stsc120836g00029 283 SMART PP2C_4 33 280 IPR001932 -
Stsc120836g00029 283 FunFam Probable protein phosphatase 2C 39 25 283 - -
Stsc120836g00029 283 SUPERFAMILY PP2C-like 31 282 IPR036457 -
Stsc120836g00029 283 Coils Coil 245 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120836g00029 Stsc-Chr120836 204092 206499 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120836g00029 1 283 PP2C-type Phosphatase Gene Family AT3G15260 70.588 7.44e-159 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120836g00029 K17506 - gmx:100500617 490.73