Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120836g00027 ATGGTGGGGTCAGGTGGAAGTGGTGGTGGTGGTGGAACTGGTGAGAGAAGCAAGGAGGCAGTTGGTATGATGGCTCTTCATGAGGCACTCAGAACCGTCTGTCTCAACTCTGACTGGACCTACTCTGTCTTCTGGACCATCCGCCCACGCCCGAGAGTTAGAGGTGGCAATGGTTGCAAGGTTGGAGACGATAACGGCAGCTTGATGTTGATGTGGGAAGATGGGTTCTGCAGAGGAAGATCAGGAGGAGGAGGTTGTCTTGTGGAAGACATGGATGGAGGAGGAGGAGGAGGAGGAGAGGACCCAGTGAGGAAGGCGTTCAGCAAGATGTCCATTCAGTTATATAATTATGGAGAAGGGTTGATGGGGAAAGTTGCATCTGATAAGTGCCACAAGTGGGTCTTCAAAGAGCCCACAGAATGTGACCCTAATATCTCCAACTACTGGCAGAGCTCCTTTGATGCTCTTCCTCCTGAATGGACCGACCAATTTGATTCTGGCATTCAGACTATTGCTGTGATTCAAGCTGGACATGGCCTTCTTCAGTTAGGCTCTTGCAAGATTATTCCTGAGGACCTGCATTTTGTGCTAAGAATGAGACACACATTTGAATCACTTGGCTACCAATCTGGTTTCTACCTCTCACAACTATTCTCATCAACAAGGAACACTTCATCTTCAACTTCAATCCCTTCAAAGCCATCTTCAATTCCAATTAGGCCACCACCACCACTCTTCAACTGGCCTCACAGGCCCTCGCTTCCGTCCTCCGCCGCCGCTTCCATGCTCTCCTCGCCCAATTTCGCCGCCTCCAGGATGGGATTCCCCAACAAGGACTCCGAGACACACATGTTTCTCATGCCACACCATCACCACCACCACCAAGAACATGGTGCAAGGATTGAGGACATGATTGGAGCTACTAATAATGTTAATGCTGCTGGTGGTGGTGGTGGTGGTGGTGATCATGACAATGATATCAAATGGCCTAATGGATTGTCCTTCTTCAACGCTTTAACCGGCCGAACCGACGAAGCTAACAAGCTATTGCAGGAACAAGCATTGAACCTCGGTCATCAGAGCCTGAATTCGGAACCAGGAAACATCCAACAGCAGCAGAATGGGAACCCGAATGAGTTCTTGAGCTTGGAAACAGGACACCCTGAAGGTGGTGGTTCTGCTGCTGCAAGGAAAATGGACAAGTTCAAGAGGAGCTTCACTTTACCTGCAAGAGTTGTTTCATCATCTTCATCAACTTCAATGGATCAACATCAACAAAGTAATGCTGTGGAGTATAGGAATTCAGATGGAGCTATGTTCCCGGATGTTATGGAAACCTTTTTGGAGTGA 1350 0.4867 MVGSGGSGGGGGTGERSKEAVGMMALHEALRTVCLNSDWTYSVFWTIRPRPRVRGGNGCKVGDDNGSLMLMWEDGFCRGRSGGGGCLVEDMDGGGGGGGEDPVRKAFSKMSIQLYNYGEGLMGKVASDKCHKWVFKEPTECDPNISNYWQSSFDALPPEWTDQFDSGIQTIAVIQAGHGLLQLGSCKIIPEDLHFVLRMRHTFESLGYQSGFYLSQLFSSTRNTSSSTSIPSKPSSIPIRPPPPLFNWPHRPSLPSSAAASMLSSPNFAASRMGFPNKDSETHMFLMPHHHHHHQEHGARIEDMIGATNNVNAAGGGGGGGDHDNDIKWPNGLSFFNALTGRTDEANKLLQEQALNLGHQSLNSEPGNIQQQQNGNPNEFLSLETGHPEGGGSAAARKMDKFKRSFTLPARVVSSSSSTSMDQHQQSNAVEYRNSDGAMFPDVMETFLE 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120836g00027 449 MobiDBLite consensus disorder prediction 367 395 - -
Stsc120836g00027 449 MobiDBLite consensus disorder prediction 367 381 - -
Stsc120836g00027 449 PANTHER GB|AAF34833.1 1 449 IPR044170 -
Stsc120836g00027 449 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 26 79 IPR025610 -
Stsc120836g00027 449 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 105 203 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120836g00027 Stsc-Chr120836 191609 194342 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120836g00027 27 235 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 30.952 3.89e-21 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120836g00027 - - gmx:100814723 553.132