Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120836g00026 ATGTTCATTTTGGAGGCTATTAATGTTTGTGTTCTGCAGACCATTGCTAATGATCCAGAAGGGGCAATCGTGCGAGCGGTTATCAGTTCTCTCATAAACATGGAGAGCACGAAGCCAAGATCCTGCGATGTTCTTGTCAGAAAGTTGCTTCAGCGGTTGGCGAGTTCAAAGGAAGATTCATTGAAGGACCTGCAGGAACTAGCAGGCCAACTATTCAGCAAGACCAAGGGAACTGGAGACACACGAAACGCCGAAGCCGATAGCCGGAGGAAACAACAGAACAAGGACATCCATCAAAATAGCAATTTGAGCCCACTAGCCAGATTTCTTCTCTCAAGATGGCAGGGCCAAAGCTCACGTGATTTAAATCAATCTTGA 378 0.463 MFILEAINVCVLQTIANDPEGAIVRAVISSLINMESTKPRSCDVLVRKLLQRLASSKEDSLKDLQELAGQLFSKTKGTGDTRNAEADSRRKQQNKDIHQNSNLSPLARFLLSRWQGQSSRDLNQS 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120836g00026 125 MobiDBLite consensus disorder prediction 72 104 - -
Stsc120836g00026 125 MobiDBLite consensus disorder prediction 80 96 - -
Stsc120836g00026 125 Coils Coil 47 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120836g00026 Stsc-Chr120836 164854 165793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120836g00026 16 125 MAP Kinase Kinase Kinase Kinase AT1G53165 46.364 1.32e-26 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120836g00026 K08838 - gmx:100815042 170.244