Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120835g00052 ATGGACTTCCCGAACGACGATTTCCTTGAGCTTCCGATTGGGAACTCCGCCGAGTCCTTGCAGAGGTTTTTGGCTTCGCAGAGAGAGCTCTTCCACAGCCAGATCGATCAGTTTCAGGAAATCGTCGTCACGCAATGCAAACTCACCGGCGTCAATCCTCTCTCTCAAGAAATGGCAGCTGGTGCTCTTTCAATAAACATCGGTAAAAGACCGAGGGATTTATTAAATCCAAAGGCTGTTAATTACATGCAATCTGTTTTTTCTATTAAGGATGCAATCAGCAAGAAAGAATCTCGAGAGATTAGTGCTTTATTTGGTGTCACAGTAACACAGGTGCGTGACTTTTTCAATGGTCAACGCTCTAGAGTGAGGAGATTTGTTCTGTTGTCAAGGGAGAAAGCATTAAAATCTAATTCTCTTGAAGAACCTCATGATGGGCTAATAAACTCTGATCCTATGAGACCAATAAATCCAGCTCCTTTAAATTCTATCATGCCCAGCAATGCTGAAAACACATCCTGTTCAACGCAGGAAGCGGCTTTGTCTGACCTAGATGACTTAGATAAGAAATTTGTTGATAATATTTTTAGTCTAATGGAGAAGGAGGAGTCATTTTCTGGACAGGAGAAACTGATGGAGTGGATATTGACAATACAGAACTTCTCAGTATTATTGTGGTTTCTAACCAGAGGAGGCGTGATGATTTTAGCAACTTGGTTGAGTGTAGCAGCTGTTGAAGAGCAAACAAGTGTCCTTCTTCTTATCTTGAAGGTTCTTTGCCATTTGCCTTTACATAAAGCCCTCCCCACGCACATATCAGCTATATTACAGTGTGTTAATAGATTGCGGTTCTACAGGACATCAGACATATCAAACAGGGCAAGGGTTTTGTTATCAAAGTGGAGCAAATTATTAGCAAGGGACCAAGCAATGAAGAAACCCAATGGTGTTAAACTTTCTAATGATGGTCTAAAAGAGAAAATGTTTTCTCAGAGTATTGGTCAAATTATGGGCTCTGAATCGTGGGATTCAAATATGGACCATGAAGACATACTTGCTCTTTCTAATGCAGACAATCTCAGGAAACTGGAGCCTTCCCAAGCTGTGAAATTGTTGCCATCCACCTCAGATGATTCTAATAAGAAGCTTGCTCTTGGTCTATCTTCATCTCAATCAAATGGCCCTAGAGCGCGCAGAAAAGTGCAACTGGTGGAACAACCAGGCCAAAAATCAGTGACCAGAAGTCCACAGGCAACAAGAGTAGCTCCTGTAAATCAAGGCCGTCCTATGTCTGCTGATGATATACAGAAAGCAAAAATGCGTGCTTTATTCATGCAGAGTAAGTATGCAAAAAATGGGTCTTCCAAGGAAAGTAAAGATGCGAAGATTGATGGTTTGCATAAGCATCCGACAAATCAGGCAGCCAGTATTGTAGCTTGCTCTGCCAAAGTTCCTGTTCCTCCCAAAATTGAAGATGACAAAAAAACGTCTTTGCTTCCCTCTAGTAAGGCCACTAATAAGCCAGAAGCATCTTATTCTAAACCGAGAATGGATGCAAATGAACCAGTGTGGGAGAAGTGCAAGAGGGTGCAAATCCCATGGAAGACACCAGCAGAAGTGAGACTCAGAGATACATGGAGTGTGGGTGCTGGTGAAAATAGCAAAGAGGTTGATGTCCAGAAAAACAGAAACCGCAGGGAGAAGGAAACTATTTATCAGACTGTCCAAGAGATACCATCTAATCCCAAAGAGCCGTGGGACCTCGAGATGGACTATGATGACACTTTGACGCTGGAAATTCCCATTGAACAGCTGCCGGATATTGATGGTACAGAACTAGTAGTTGCCCCTGATGAGGTTGCAACTCATGCTGTTCAAGGGGTGGCCACAACATCTTCGACCAGTAATGTAGCTGATACTGCTCAACCTGACTTGGAACTGCTAGCAGTGTTACTCAAAAATCCAGATTTGGTATTTGCCTTAACTTCGGGACAAGGTGGTATCCAAAGTGAGGAAACCGTGAAGGTACTTGACATGATCAAGAGAGGTGGCTTGAACTTGGGTACAAATGATACAAATCATGGCAATGGCATTAGTGCAAAGACCACAGAGAAGGTGGAAGTCTCACTCCCCTCGCCAACTCCTTCAAGTGATCCAAGAACGAGTGGATGGAGCACAGTACCACCAAAGAATCCTTTTTCTCGGCAAAACTTAGAATCTGCTAGAAGCTACCCTGCAGTGGCAACTACCAACTTAATATCTCAAGTTCCAGCGACCGGCACTACAGTACTACGGCAGCAGCCGGCAATGGCGCTTCCATCTTCAAATCCCTTCACCAGCACTGTAGTTTCCTCATATTCACTGCCTCAGGCAACTAATGTACCTGAGACTGAGCGGCAACCACCCCTTGCTCTTTCCTCTATGCATGTACAACAAACACCACTCTCAGATATAGGTTTAACCATGAAGAACATAACGAATACAAATCCATCTTCGGCTAACTTAGCCGGGGCATATTCACCTTTAGCAATGCGGGTCAACGGCACCAGTAATGTAAAACCAGTACCTAATATGAGTGTTGAAGACGGTTTGTCTAATTCATTTCCCCAATCCTTCAGGTTGGCCTCCGCAACCCCTTCACTTTCAACCACACAGCAACAACAAAGACATTCACACTTGCCCCCTCAGCAAGGCCATTTCCCTGAACCTTCATACCGCAACAGTGTACATTCCTATCCATCACCACAAATTGAAAAACCAGGGCAAGTTTCAGATTCTTGGAGAGTTAGGCAAGAGATGCCATCATCCAGTTACCATTCCAATAGAAATCAAAACTACTATAGCAACGCATATGTTGGGGGGTCCATGCAGGGTGGTCCTTCTTGGGATAGAAACGATCATGCAACAAGGGAACACTATGATACATGGAGCCCAGATGATAGTCCAAGTAGAAATCCTAGGTATGTTCCTGGTAGGAGTTTCCCAGAGTCCAGAGTGAATAATCAGCATGGAAGAAACCATAGGCCTGATTGGTCAAGGCAGCGTGGTTCTTCTGGACACTGGGACCCTGCTAGGCAGGGAAACAGAAAGTGGCATGACCAGAGACGATGA 3111 0.4417 MDFPNDDFLELPIGNSAESLQRFLASQRELFHSQIDQFQEIVVTQCKLTGVNPLSQEMAAGALSINIGKRPRDLLNPKAVNYMQSVFSIKDAISKKESREISALFGVTVTQVRDFFNGQRSRVRRFVLLSREKALKSNSLEEPHDGLINSDPMRPINPAPLNSIMPSNAENTSCSTQEAALSDLDDLDKKFVDNIFSLMEKEESFSGQEKLMEWILTIQNFSVLLWFLTRGGVMILATWLSVAAVEEQTSVLLLILKVLCHLPLHKALPTHISAILQCVNRLRFYRTSDISNRARVLLSKWSKLLARDQAMKKPNGVKLSNDGLKEKMFSQSIGQIMGSESWDSNMDHEDILALSNADNLRKLEPSQAVKLLPSTSDDSNKKLALGLSSSQSNGPRARRKVQLVEQPGQKSVTRSPQATRVAPVNQGRPMSADDIQKAKMRALFMQSKYAKNGSSKESKDAKIDGLHKHPTNQAASIVACSAKVPVPPKIEDDKKTSLLPSSKATNKPEASYSKPRMDANEPVWEKCKRVQIPWKTPAEVRLRDTWSVGAGENSKEVDVQKNRNRREKETIYQTVQEIPSNPKEPWDLEMDYDDTLTLEIPIEQLPDIDGTELVVAPDEVATHAVQGVATTSSTSNVADTAQPDLELLAVLLKNPDLVFALTSGQGGIQSEETVKVLDMIKRGGLNLGTNDTNHGNGISAKTTEKVEVSLPSPTPSSDPRTSGWSTVPPKNPFSRQNLESARSYPAVATTNLISQVPATGTTVLRQQPAMALPSSNPFTSTVVSSYSLPQATNVPETERQPPLALSSMHVQQTPLSDIGLTMKNITNTNPSSANLAGAYSPLAMRVNGTSNVKPVPNMSVEDGLSNSFPQSFRLASATPSLSTTQQQQRHSHLPPQQGHFPEPSYRNSVHSYPSPQIEKPGQVSDSWRVRQEMPSSSYHSNRNQNYYSNAYVGGSMQGGPSWDRNDHATREHYDTWSPDDSPSRNPRYVPGRSFPESRVNNQHGRNHRPDWSRQRGSSGHWDPARQGNRKWHDQRR 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120835g00052 1036 MobiDBLite consensus disorder prediction 686 740 - -
Stsc120835g00052 1036 MobiDBLite consensus disorder prediction 380 397 - -
Stsc120835g00052 1036 MobiDBLite consensus disorder prediction 406 424 - -
Stsc120835g00052 1036 SUPERFAMILY Homeodomain-like 68 129 IPR009057 -
Stsc120835g00052 1036 MobiDBLite consensus disorder prediction 958 1036 - -
Stsc120835g00052 1036 MobiDBLite consensus disorder prediction 878 894 - -
Stsc120835g00052 1036 MobiDBLite consensus disorder prediction 380 431 - -
Stsc120835g00052 1036 MobiDBLite consensus disorder prediction 685 740 - -
Stsc120835g00052 1036 MobiDBLite consensus disorder prediction 488 517 - -
Stsc120835g00052 1036 MobiDBLite consensus disorder prediction 1001 1015 - -
Stsc120835g00052 1036 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 106 1018 - -
Stsc120835g00052 1036 SMART HOX_1 68 130 IPR001356 GO:0003677
Stsc120835g00052 1036 ProSiteProfiles 'Homeobox' domain profile. 66 126 IPR001356 GO:0003677
Stsc120835g00052 1036 MobiDBLite consensus disorder prediction 964 978 - -
Stsc120835g00052 1036 MobiDBLite consensus disorder prediction 878 925 - -
Stsc120835g00052 1036 MobiDBLite consensus disorder prediction 901 921 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120835g00052 Stsc-Chr120835 198131 206455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120835g00052 519 737 Homeobox Transcription Factor Family AT4G02560 51.818 4.43e-47 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120835g00052 - - adu:107492506 1811.96