Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120835g00049 ATGCCTGAAGAAGATGTTGTAGTTGTTGTGGATGTGGACAAAATTGATGAAAACAATAATAATGAAGAAGACATGGAACAACAACAAGATTCTGATCTCATGGAAAAGAAGAATCCTCCTTGCCAAAACTTGCGAAGAAATGATTCTCTGGAAATGGAATCTCAAAGATTCCCCAGCTCCACCACTCATGCAGCAAAAGGGCCATCTACGTGGTTGATACTTCAACTTGCATTCCAAAGCATAGGGATTGTGTACGGTGATATTGGAACATCACCATTGTACGTGTATTCAAGCACATTCACTGATGGCATCAAGAACAATGATGACATCTTGGGTGTTCTTTCCTTGATCTTCTATACACTTACTCTCATCCCTCTCGTTAAGTATGTCTTTGTGGTCTTAAGGGCCAATGATAATGGCGATGGAGGAACTTTTGCTCTTTATTCTCTAATATGTCGTTATGCTAAAGTGGGACTCATTCCTAACCAACAACTTGAGGATGCTCAAGTCTCTAACTACCAGCTTCAGCTGCCAAGTAACCGTGAGAAGAGAGCATCAAAGCTTAAATCTGCTCTTGAGAATAACCATTTTCTCAAGCTCTTCCTCTTATTTGCTACCATGCTTGGCACTTCCATGGTTATTGGTGATGGTGTTCTCACCCCTTGCATCTCTGTTTTATCTGCTGTTGGAGGGATCAAGCAAGCAGCTTCTAACATCACTGATGATATGGTTGTTCTGATATCCGTGGCAATCTTGGTTTGCCTTTTCATGGTTCAGAGGCTTGGAACTGATAAAGTGGGATATACCTTTGCTCCTATTATCTGTATATGGTTTGCCTTCATAGGAGGCATTGGTGTATACAATTTCATCAAGCATGATCCCACTGTTATTAAAGCAATTAATCCAAAGTACATAGTTGACTACTTCATTAGGAACAAGAAAGATGCTTGGATTTCCCTTGGTGGTGTTGTTCTAGCCATAACTGGAACTGAAGCACTCTTTGCTGATGTTGGACATTTCACTGTTCGATCCATTCAAATCAGCATGTGCTCTGTCACTTACCCTTCTCTCATTTGTGCTTATCTTGGACAAGCCTCTTTCCTTCGCAACCATAATCATCTTGTTAGTGACACATTCTACAAGTCCATACCAGGAAATCTGTATTGGCCAATGTTTGTTATTGCTGTTATGGCAGCAATCATAGCTTCACAAGCCATGATCTCAGGAACTTTCTCCATAATCCAACAATCCTTGTCATTGGGATGTTTCCCACGTGTGAGAATTGTACACACATCAAGCAAGCATGAAGGACAAGTTTATATTCCAGAAATCAATTACATCCTTATGATTGCATGTATTGCCATCACTGTTGGATTCAAAACCACTGCAAAAATTGGCAATGCCTATGGGATAGCAGTGGTGTTTGTAATGACACTTACATCTGGTTTTCTAGTACTAATCATGATCATGATATGGAAGACTAACATACTTTTGATAATTAGCTATGTGCTAATCATTGGTTCTGTGGAAGTTATTTATCTAAGCTCAGTGTTATACAAATTTGACCAAGGAGGGTATCTTCCCCTTGCATTCGCCGCGGTTCTAATGTTCATCATGTATGTTTGGAACAATGTGTACAGAAGGAAGTACTACTATGAATTGGATCACAAGATTTCACCAGAGAAGGTTAAAGAGATTGCTTGCAACACAAGTTTGTGCAGATTACCTGGGCTAGCCATGTTCTATTCAGAGCTAGTTCAAGGTATTCCACCAATTTTCAAGCACTATGTGGCAAACGTACCTGCATTGCACTCAGTTCTCATCTTTGTTTCAATCAAGTCCTTGCCTATTAGCAAAGTTCCAACAGAAGAGAGGTTCTTGTTTCGCCGTGTGCACCCGAAAGAACTCAATGTATTCAGGTGTGTTGTAAGGTATGGATACACCGATGTGCGCAACGAGGAAGAGCCTTTCGAGAAGCTGTTGGTTGAAAGATTGAAGCAGTTCATAGTTGATGAGTTCTGGTTGTCCCAAAATGGTGAAGAAGAAGAAGAAGAAGAACAAGAGTGCATTGAGAGAGAGATAGAGAGAGTTGAGAAGGCATCAGAAGATGGTGTTGTTCACTTGATTGGTGAGAATGAAATAGTTGCTTGCAAAGGAGCAAACATTGGAAAGAGGATTCTGATTGATTATGCCTACAACTTCTTGAAGAAAAACTTGAGGCAGAGTGACAAACTATTTGATATTCCACACAAACGCATGGTTAAAGTGGGCATGACTTATGAACTTTGA 2289 0.4028 MPEEDVVVVVDVDKIDENNNNEEDMEQQQDSDLMEKKNPPCQNLRRNDSLEMESQRFPSSTTHAAKGPSTWLILQLAFQSIGIVYGDIGTSPLYVYSSTFTDGIKNNDDILGVLSLIFYTLTLIPLVKYVFVVLRANDNGDGGTFALYSLICRYAKVGLIPNQQLEDAQVSNYQLQLPSNREKRASKLKSALENNHFLKLFLLFATMLGTSMVIGDGVLTPCISVLSAVGGIKQAASNITDDMVVLISVAILVCLFMVQRLGTDKVGYTFAPIICIWFAFIGGIGVYNFIKHDPTVIKAINPKYIVDYFIRNKKDAWISLGGVVLAITGTEALFADVGHFTVRSIQISMCSVTYPSLICAYLGQASFLRNHNHLVSDTFYKSIPGNLYWPMFVIAVMAAIIASQAMISGTFSIIQQSLSLGCFPRVRIVHTSSKHEGQVYIPEINYILMIACIAITVGFKTTAKIGNAYGIAVVFVMTLTSGFLVLIMIMIWKTNILLIISYVLIIGSVEVIYLSSVLYKFDQGGYLPLAFAAVLMFIMYVWNNVYRRKYYYELDHKISPEKVKEIACNTSLCRLPGLAMFYSELVQGIPPIFKHYVANVPALHSVLIFVSIKSLPISKVPTEERFLFRRVHPKELNVFRCVVRYGYTDVRNEEEPFEKLLVERLKQFIVDEFWLSQNGEEEEEEEQECIEREIERVEKASEDGVVHLIGENEIVACKGANIGKRILIDYAYNFLKKNLRQSDKLFDIPHKRMVKVGMTYEL 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120835g00049 762 NCBIfam potassium uptake protein 76 761 IPR003855 GO:0015079|GO:0016020|GO:0071805
Stsc120835g00049 762 Coils Coil 680 700 - -
Stsc120835g00049 762 Pfam K+ potassium transporter 77 649 IPR003855 GO:0015079|GO:0016020|GO:0071805
Stsc120835g00049 762 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 62 761 IPR003855 GO:0015079|GO:0016020|GO:0071805
Stsc120835g00049 762 MobiDBLite consensus disorder prediction 1 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120835g00049 Stsc-Chr120835 174457 177647 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120835g00049 16 762 Inorganic Solute Cotransporters AT4G13420 52.911 0.0 853
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120835g00049 K03549 - qsa:O6P43_010741 1139.02