Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120835g00048 ATGATGACGAAGAGGAAAAGCCAGAGGAAGATTGGGAAGAAGGAGAGGAGCAACTTCACCATGAAGAAGGGCACTCTTTCAACCACCTCCCACCTTCAGCTGAAGCTAGGTCAAGTCTCTCTCTTCCCCTTCCTTAATCCTCCTTCTTCCTCCTCTTCTGTTCCCGCTCCTTCTTCCCGCTTTCAGAGCCTTCTAGATGCGGAATCTCACCGCCCAAACCCTCCCGCTTCTTCCTCCCACCCATCGGCGGTCACCGACAACGACGCCCCCGACGACAGAGACTGTATTCTTAGCCAGGACTTCTTTTGCACTCCGGATTATATTACGCCGGATAATCAGAACGTTCTCAACGCCTTGGATTTCAATAAGGAGAATACACCTTGCCCTAAATCTCCGGAGAAGCTCAACACTACAAAAAGCAAGAGGTGTCGATTGGATGCTATCGCAGTAAATCCTCTCAGCCCAAACTTTTCTAGTGACAATCAACAAGTTGTTGAGCTTGGTAAGGACTCTGTTATGGAGGAAGTAGCTGCTGAGAAAACAGTGGCAGCTGATACACCAAAGCCCCAAAATTATGTGTCACATTCTGCAGTTGCATTGCGCTGCAGGGTTATGCCTCCTCCCTGCATCCAGAATCCCTATTTGAAAGATGTTTCAGAAAATGAGACAGACCCCTTTGGAAACCAAAGGTTAAAATGTGCAGGTCTCTTCCCTGCAATAACTGGTGATGATGGTTTTTCACGCTATCGCAATGATTTTCATGAGATTGAGCAAATTGGCAGAGGGCATTTTAGTAGTGTTTTCAAAGTATTAAAACGAATAGATGGTTGCCTTTACGCTGTGAAACGCAGTGCCAGACAGTTACGTCTGGAAACAGAAAGGAGGAAAGCTTTGATGGAAGTTCAAGCATTGGCTGCTTTAGGTTATCATGCAAACATAGTGGGGTACTATTCTTCATGGTTTGAAAATGAACAGCTGTATATCCAGATGGAGCTTTGTGATCATAGCTTATCCATAAAGAAATGCTCTGCTTCCTTCACAGAAGGACAAGTGTTAGAGGCTCTATATCAGGTTGCCAATGCACTGAAATTTATTCACGAGAAGGGAATAGCTCATTTAGATGTTAAGCCTGATAATATTTATGTAAAAAATGGTGTATATAAGCTTGGTGATTTTGGATGTGCAACTCGCCTTGACAATAGCCTCCCAGTTGAGGAGGGAGATGCACGTTATATGCCTCAAGAAATCCTTAATGAGAATTATGATCACCTCGACAAAGTTGATATCTTTTCTTTGGGAGCTTCTATGTATGAGTTCATTCGGCGATTGCCTTTGCCAGAATCAGGATGTCAATTTTTTAATCTTAAGGAGGGAAAGCTACCACTTTTGCCTGGCCACTCGTTACAATTCCAAAACTTGCTCAAGGCCATGATGGACCCTGATCCAGTTAAACGTCCTTCTGCTGGGGAGTTGATAGAGAATCCAATTTTCGACAAGATCAGAACAGCCAAAAATTGA 1518 0.4407 MMTKRKSQRKIGKKERSNFTMKKGTLSTTSHLQLKLGQVSLFPFLNPPSSSSSVPAPSSRFQSLLDAESHRPNPPASSSHPSAVTDNDAPDDRDCILSQDFFCTPDYITPDNQNVLNALDFNKENTPCPKSPEKLNTTKSKRCRLDAIAVNPLSPNFSSDNQQVVELGKDSVMEEVAAEKTVAADTPKPQNYVSHSAVALRCRVMPPPCIQNPYLKDVSENETDPFGNQRLKCAGLFPAITGDDGFSRYRNDFHEIEQIGRGHFSSVFKVLKRIDGCLYAVKRSARQLRLETERRKALMEVQALAALGYHANIVGYYSSWFENEQLYIQMELCDHSLSIKKCSASFTEGQVLEALYQVANALKFIHEKGIAHLDVKPDNIYVKNGVYKLGDFGCATRLDNSLPVEEGDARYMPQEILNENYDHLDKVDIFSLGASMYEFIRRLPLPESGCQFFNLKEGKLPLLPGHSLQFQNLLKAMMDPDPVKRPSAGELIENPIFDKIRTAKN 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120835g00048 505 Gene3D Phosphorylase Kinase; domain 1 243 331 - -
Stsc120835g00048 505 FunFam WEE protein kinase 243 331 - -
Stsc120835g00048 505 MobiDBLite consensus disorder prediction 45 85 - -
Stsc120835g00048 505 SMART serkin_6 253 497 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc120835g00048 505 MobiDBLite consensus disorder prediction 1 28 - -
Stsc120835g00048 505 ProSiteProfiles Protein kinase domain profile. 253 497 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc120835g00048 505 SUPERFAMILY Protein kinase-like (PK-like) 248 501 IPR011009 -
Stsc120835g00048 505 ProSitePatterns Serine/Threonine protein kinases active-site signature. 370 382 IPR008271 GO:0004672|GO:0006468
Stsc120835g00048 505 MobiDBLite consensus disorder prediction 45 91 - -
Stsc120835g00048 505 FunFam Wee1-like protein kinase 332 501 - -
Stsc120835g00048 505 ProSitePatterns Protein kinases ATP-binding region signature. 259 282 IPR017441 GO:0005524
Stsc120835g00048 505 Pfam Protein kinase domain 253 497 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc120835g00048 505 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 78 499 - -
Stsc120835g00048 505 Gene3D Transferase(Phosphotransferase) domain 1 332 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120835g00048 Stsc-Chr120835 168707 171906 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120835g00048 1 501 Core Cell Cycle Gene Families AT1G02970 60.317 0.0 602
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WEE Stsc120835g00048 Pkinase 1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120835g00048 K06632 - gmx:547742 764.992