Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120835g00021 ATGGTGCTTGCAAAAGGGAATAACAACAACAATGGTTATGTTAGAGAAGCTTGCAGTGTAACAAGGTACCAAGACTTGTGTGTGCATTCACTAGCACAATTCTCCAACACTGCGGGAACAAGTCCTAGCAAGTGGGCACGTGCAGGGGTATCAGTTACAATAGGTGAGGTAAAGAAACTTCGAGCTTACTTGGCACAGTTGAAGAGGAATGGAGGATTCATGGGAAGAAACAGAGCTGCACTTTCAGATTGTGCTGAGGTTTTTGATGATGCACTTGATGAGCTTCATAGATCACTTGGTGTGCTAAGAAAGCTCAGCAAAACCACGTTTAGCACACAAATGGAGGATCTCAATACGTGGATAAGCGCGGCACTAACCGATGAAGATACTTGCCTTGATGGATTTCAAGAACAAGATAATCATAATCATAATAATAATAGTAAGAAGCAGATCAAGTTGCTGCAGAGTAGGGTGCAGAATGTGTCTTATATAACCAGCAATGCTCTTGCTCTTGTTAACAAGCTTGCTACCACAGGTATTGGAAGCAACCTTGATCAACACAAATCCTGA 570 0.4228 MVLAKGNNNNNGYVREACSVTRYQDLCVHSLAQFSNTAGTSPSKWARAGVSVTIGEVKKLRAYLAQLKRNGGFMGRNRAALSDCAEVFDDALDELHRSLGVLRKLSKTTFSTQMEDLNTWISAALTDEDTCLDGFQEQDNHNHNNNSKKQIKLLQSRVQNVSYITSNALALVNKLATTGIGSNLDQHKS 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120835g00021 189 Gene3D Invertase/pectin methylesterase inhibitor family protein 9 177 IPR035513 -
Stsc120835g00021 189 PANTHER PECTINESTERASE INHIBITOR-LIKE 8 171 - -
Stsc120835g00021 189 Pfam Plant invertase/pectin methylesterase inhibitor 14 171 IPR006501 GO:0004857
Stsc120835g00021 189 SMART PMEI_2 9 171 IPR006501 GO:0004857
Stsc120835g00021 189 NCBIfam pectinesterase inhibitor domain 7 175 IPR006501 GO:0004857
Stsc120835g00021 189 CDD PMEI-like_3 17 177 - -
Stsc120835g00021 189 FunFam Pectinesterase inhibitor 3 9 176 - -
Stsc120835g00021 189 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 12 175 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120835g00021 Stsc-Chr120835 77137 77706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120835g00021 9 186 Carbohydrate Esterase AT3G14310 33.516 1.58e-22 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120835g00021 - - adu:107492431 323.553