Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120835g00020 ATGAAGCTAAGTTGGGAGCAAAGCGCAATTCTCTTCCTCCTGGTGAGTGGTGACTTGGGTTTGCCTTTGGCTATTGATGAAACTATGCGCTACATTACCTTCTCTTTGATGACATTTCGGGAGGCAAAGCGGGATGTCACATTGAATGGTTATCTTATTCCCAAAGGTTGGAAGGTTTTTGTTTGGTATAGGGCTATTCACCAAGATCCAGAGGTTTATCCTAATCCAAGGATATTTGATCCTTCAAGATTTGATGTAAGTAAGTAG 267 0.4157 MKLSWEQSAILFLLVSGDLGLPLAIDETMRYITFSLMTFREAKRDVTLNGYLIPKGWKVFVWYRAIHQDPEVYPNPRIFDPSRFDVSK 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120835g00020 88 PANTHER CYTOCHROME P450 26 24 84 - -
Stsc120835g00020 88 Gene3D Cytochrome P450 13 88 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120835g00020 88 Pfam Cytochrome P450 24 86 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120835g00020 88 PRINTS B-class P450 signature 23 34 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120835g00020 88 PRINTS B-class P450 signature 68 83 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120835g00020 88 PRINTS B-class P450 signature 40 67 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120835g00020 88 SUPERFAMILY Cytochrome P450 21 85 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120835g00020 Stsc-Chr120835 71149 72038 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120835g00020 6 85 Cytochrome P450 AT1G05160 54.945 3.29e-27 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120835g00020 K04123 - vvi:100246155 106.686