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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Stsc120835g00006
ATGACATTCCGAAACACAGCTGGGCCTGAGAAGCACCAAGCGGTAGCGGTTAGAAACGGAGCAGATTTCTCCACATTCTACAGCTGCAGCTTCGAAGGTTACCAAGACACACTTTATGTACACACAATGAGACAATTTTACAGAGAATGTGACATTTATGGTACCGTAGATTTCATATTTGGGAACGCCAAGGTTGTGTTCCAGAGCTGCAACCTATACCCTCGGCTTCCCATGAAAGGACAATTCAACGCTATAACCGCACAAGGCCGAACGGACCCTAACCAGGACACGGGAATCTCCATCCACAACTGTACCATTAGAGCCGCGGATGACCTGGTGGCGGCGGGAAGGGGCGCTGCGCCCACGTATTTGGGGAGGCCATGGAAGGAATATTCGAGAACGGTGTACATGCAAACAATGATGGATGGTGTGGTGGATAGTGCAGGGTGGCGTGCATGGGACAGAGATTTTGCGTTGACCACTCTCTATTATGCTGAGTTTAATAACACCGGGGTGGGGGCCACTACTGCTAATAGGGTGACGTGGCAGGGTTACCATGTGATTAACACAACGGATGCTGCTAACTTTACTGTTTCCAACTTCTTGCTTGGAGATAATTGGTTGCCCAAGACTGGAGTGGCTTACACCAATGCCTTTATTTAG
663
0.4932
MTFRNTAGPEKHQAVAVRNGADFSTFYSCSFEGYQDTLYVHTMRQFYRECDIYGTVDFIFGNAKVVFQSCNLYPRLPMKGQFNAITAQGRTDPNQDTGISIHNCTIRAADDLVAAGRGAAPTYLGRPWKEYSRTVYMQTMMDGVVDSAGWRAWDRDFALTTLYYAEFNNTGVGATTANRVTWQGYHVINTTDAANFTVSNFLLGDNWLPKTGVAYTNAFI
220
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Stsc120835g00006
220
PANTHER
PECTINESTERASE
1
209
-
-
Stsc120835g00006
220
Pfam
Pectinesterase
1
205
IPR000070
GO:0030599|GO:0042545
Stsc120835g00006
220
ProSitePatterns
Pectinesterase signature 2.
52
61
IPR033131
-
Stsc120835g00006
220
SUPERFAMILY
Pectin lyase-like
1
216
IPR011050
-
Stsc120835g00006
220
Gene3D
-
1
219
IPR012334
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Stsc120835g00006
Stsc-Chr120835
23051
23889
Tandem
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Stsc120835g00006
1
220
Carbohydrate Esterase
AT4G02330
73.182
1.00e-122
357
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Stsc120835g00006
K01051
-
gmx:100790729
380.948
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