Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120834g00051 ATGATTGAAGCTTCAAACAGCCGTAATAATAATAATAAGGTGTCTGCCTTATACGTGTTTGGAGACTCCACGGTAGACCCGGGAAACAACAACTATATTAGAACAGCATTTAAGAGCAATTTTGAACCCTACGGTAGAGATCTTGCAAATCATGTTCCCACTGGAAGGTTCACCAATGGAAAGCTAGGCACTGATTTTATTGCTTCGTATGTAGGGCTTAAAGATTTGTTGCCACCATATTTGGATCCAAATATCACAAACCAAGAACTCATCACAGGAGTCAGCTTTGCCTCTGCTGGCTCTGGTTATGACCCACTTACACCAACTCTAAGTAATGTAATTTCAATTCCAAGACAGTTGGGACATTTCAGAGAATACAAAAATAGGTTGGAGAGTATACTTGGTAAACAGAAAACAGAGGATCATATGAAGAAGGCTATATTTTTCATCAGTGCAGGAACAAATGACTTTGTTATTAATTACTTTACATTGCCAATTAGAAGAAGAACCCACACCCTCATAGCATACCACCAGTTTTTGCTTCAACATGTACAAGATTTCATACAGGAATTGTTGAGTGAAGGTGCTAGAAAGTTAGCAGTGGTTGGACTACCCCCAATGGGATGCTTGCCAATAATGATCACCTTCAATTCCAATAATGCCTTTCTTGAACGTGGTTGTGTCGATATCTTTTCTTCTGTTGCAAGAAATCACAATCTCCTCCTTCAAAACCACTTGAACTTGATGCAATTGAATTCCTCTCTCTCTACTAAGATCTCTTACATTGACATATATCAACCCTTGTCCAACATGATTCAAGACTCTCTTAACAGCGGTTTTGATGAGGTAGATAGTGGTTGTTGTGGAAGTGGTTACATTGAAGCAGCGTTTATGTGTAACAGAGCTTCACATTTGTGTTCTGATGCATCAAAGTATGTATTCTGGGACTCAATACACCCTACTGAGAAGGCATACTATAACTTATACATGGATTCACGTCACGTCATTGATGCACTTGTAAACGCCTAG 1029 0.3916 MIEASNSRNNNNKVSALYVFGDSTVDPGNNNYIRTAFKSNFEPYGRDLANHVPTGRFTNGKLGTDFIASYVGLKDLLPPYLDPNITNQELITGVSFASAGSGYDPLTPTLSNVISIPRQLGHFREYKNRLESILGKQKTEDHMKKAIFFISAGTNDFVINYFTLPIRRRTHTLIAYHQFLLQHVQDFIQELLSEGARKLAVVGLPPMGCLPIMITFNSNNAFLERGCVDIFSSVARNHNLLLQNHLNLMQLNSSLSTKISYIDIYQPLSNMIQDSLNSGFDEVDSGCCGSGYIEAAFMCNRASHLCSDASKYVFWDSIHPTEKAYYNLYMDSRHVIDALVNA 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120834g00051 342 Gene3D SGNH hydrolase 3 337 IPR036514 -
Stsc120834g00051 342 Pfam GDSL-like Lipase/Acylhydrolase 17 325 IPR001087 GO:0016788
Stsc120834g00051 342 SUPERFAMILY SGNH hydrolase 143 326 - -
Stsc120834g00051 342 PANTHER GDSL ESTERASE/LIPASE EXL3 14 328 - -
Stsc120834g00051 342 CDD SGNH_plant_lipase_like 16 342 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120834g00051 Stsc-Chr120834 343759 347772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120834g00051 11 325 Pollen Coat Proteome AT1G75910 34.277 1.76e-55 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120834g00051 - - gmx:100804919 474.552