Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120834g00049 ATGTTGAATTCAGCATTGTCATCCTTTCACAATGATGCCACTTCGCATTTGCAACTTCCAAAAGTATCATTATGGAAATGGAACAAGTTTGAGGTAAATTTAGTTGAAGCTGCTGCTAAGCATGCAAAAGTTAATACTCTTAATAAGAATGAAGCTGCAACTTCTTCTTCTTCACCATGCTTAGCCAATGTTGTTACCAACAATGGCACCCGCCGCCATCGCCAGCTCGCAGTCGATTACTATGCAAAAACATGTCCCAATTTAGAACAGCTTGTAGGCTCAGTCACCAGCCAACAATTCAAAGAATCACCTGTTTCTGGACCTGCCACCATTAACCTCTTCTTCCATGATTGTTTTGTAGAAGGGTGTGATGGATCAATTCTGATAGCATCAAAGCAAGGGAGCAAAGAATTGGCAGAGAAAGATGCAGAGGTTAACAGAGAATTGAGAGTGGAAGGTTTTGAGACAGTGAGAAAAGCTAAGGAAGCAGTGGAGAGAAAGTGTCCTGGTGTAGTTTCATGTGCAGACATTCTTGCAATTGCTGCAAGAGATTATGTGCACTTGGCAGGGGGGCCATACTACCAAGTGAAGAAGGGAAGATGGGATGGGAGGATATCAATGGCATCAAGGGTGGAACCCAACATCCCTCATGCAAATGACACCGTTGATCAGCTCATCAAGCTCTTCAACACAAAAGGCTTAACCATACAAGACATGGTTGCTCTCTCTGGTGCCCACTCAATAGGTTTTGCACACTGCAAGCACTTTGTGACAAGGCTATACAATTACAAGGGCAAAGGTCAACCAGACCCAAACGTTGACCCCAAACTCCTCAATGCACTGAGAATGTATTGCCCTAACTATGGTGGAAACATGGACATTGTTGCCCCATTTGATGCAACTACACCATTTGTATTTGACCAAGCATATTATGTCAACTTGCAGAAGAAGATGGGGCTGTTAGCTTCTGATCAGGCTTTGGCTTTGGACCCAAGAACAAAAGCTTTTGTTCAAGAGTTTGCAAATGATAAGAACAAATTTTTTCAAGCTTTTGCAGCTGCCATAGATAGATTGAGTTTGGTGGGAGTGAAGAGAGGGAAAAAGCATGGAGAGAAGAGAAGAGACTGCAGCATGCATGCATGA 1143 0.4313 MLNSALSSFHNDATSHLQLPKVSLWKWNKFEVNLVEAAAKHAKVNTLNKNEAATSSSSPCLANVVTNNGTRRHRQLAVDYYAKTCPNLEQLVGSVTSQQFKESPVSGPATINLFFHDCFVEGCDGSILIASKQGSKELAEKDAEVNRELRVEGFETVRKAKEAVERKCPGVVSCADILAIAARDYVHLAGGPYYQVKKGRWDGRISMASRVEPNIPHANDTVDQLIKLFNTKGLTIQDMVALSGAHSIGFAHCKHFVTRLYNYKGKGQPDPNVDPKLLNALRMYCPNYGGNMDIVAPFDATTPFVFDQAYYVNLQKKMGLLASDQALALDPRTKAFVQEFANDKNKFFQAFAAAIDRLSLVGVKRGKKHGEKRRDCSMHA 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120834g00049 380 ProSitePatterns Peroxidases proximal heme-ligand signature. 238 248 IPR019793 -
Stsc120834g00049 380 FunFam Peroxidase 79 225 - -
Stsc120834g00049 380 PANTHER - 71 378 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc120834g00049 380 CDD secretory_peroxidase 75 377 IPR033905 GO:0004601|GO:0042744
Stsc120834g00049 380 PRINTS Plant peroxidase signature 109 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc120834g00049 380 PRINTS Plant peroxidase signature 297 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc120834g00049 380 PRINTS Plant peroxidase signature 171 181 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc120834g00049 380 PRINTS Plant peroxidase signature 353 366 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc120834g00049 380 PRINTS Plant peroxidase signature 190 205 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc120834g00049 380 PRINTS Plant peroxidase signature 85 104 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc120834g00049 380 PRINTS Plant peroxidase signature 152 165 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc120834g00049 380 PRINTS Plant peroxidase signature 237 249 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc120834g00049 380 PRINTS Plant peroxidase signature 313 330 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc120834g00049 380 FunFam Peroxidase 216 358 - -
Stsc120834g00049 380 Pfam Peroxidase 95 343 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc120834g00049 380 SUPERFAMILY Heme-dependent peroxidases 75 378 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc120834g00049 380 Gene3D Peroxidase, domain 2 216 358 - -
Stsc120834g00049 380 PRINTS Haem peroxidase superfamily signature 299 314 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc120834g00049 380 PRINTS Haem peroxidase superfamily signature 238 253 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc120834g00049 380 PRINTS Haem peroxidase superfamily signature 172 189 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc120834g00049 380 PRINTS Haem peroxidase superfamily signature 107 121 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc120834g00049 380 PRINTS Haem peroxidase superfamily signature 190 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc120834g00049 380 ProSiteProfiles Plant heme peroxidase family profile. 75 380 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc120834g00049 380 Gene3D - 79 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120834g00049 Stsc-Chr120834 323237 330234 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120834g00049 58 376 Peroxidase AT2G34060 63.323 1.83e-156 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120834g00049 K00430 - gmx:100777463 523.472