Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120834g00045 ATGGGTTCAGGCCATTGGTTTATGACAATACTTCGATTAAGAAAATCAAATCAAAGCAGATCAAAGAAATCAAAGGGATCTTTAGCTTCATTGAAGATAAAGAATAATACAAAAGGAGAGTATAGTGATTTACAAAATGGAACTAGTACTACAAGCGAAAATCTTGTGTCGTCTGAGGTACCACTTGAAACTATTGCTGCAACAAGAATACAGATGGCATTCCGGGCATACAAGGCTAGAAAAACTTTAGGCCGCTTAAAAAGATTGGCGAAACTAAAGATTCTGACAGAAGGTCACTCTGATAGAAAACAAGCTAGTACAGCCATAAAATATCTTCATTCATGGAGTAAGATACAGGCAGATATTAGAGCTCACCGAATCTGTATGGTGACAGAAGGCAGGATCAGGCAGAAGAAACTAGATTCTCAGCTAAAGCTTGAGGCAAAGCTCCATGATTTGGAGGTAACCTTCCCATACATTGTGGTGGATTGGAGTGGAGGTCCTGAAACCATGGAAGAAATCATTGCAAGGCTATATCAGAGAGAAGAAGCAGCAATTAAGAGGGAAAGAGCCATGGCTTATGCCTTTTCTCATCAGTGGAGGGCCAACTCTAGTCAGAGTCAAGCACTAGGAAGTTATGAACTCTGCAAAACTAATTGGGGTTGGAGTTGGAAGGAGCGGTGGATTGCGGCTCGGCCGTGGGAAAGCCGCGTCTCCAACCTAACCATTAGTCCTGCACTCCTGTGA 747 0.4244 MGSGHWFMTILRLRKSNQSRSKKSKGSLASLKIKNNTKGEYSDLQNGTSTTSENLVSSEVPLETIAATRIQMAFRAYKARKTLGRLKRLAKLKILTEGHSDRKQASTAIKYLHSWSKIQADIRAHRICMVTEGRIRQKKLDSQLKLEAKLHDLEVTFPYIVVDWSGGPETMEEIIARLYQREEAAIKRERAMAYAFSHQWRANSSQSQALGSYELCKTNWGWSWKERWIAARPWESRVSNLTISPALL 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120834g00045 248 PANTHER IQ-DOMAIN 5-RELATED 1 235 - -
Stsc120834g00045 248 Pfam IQ calmodulin-binding motif 66 81 IPR000048 GO:0005515
Stsc120834g00045 248 ProSiteProfiles IQ motif profile. 63 91 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120834g00045 Stsc-Chr120834 285951 287331 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120834g00045 1 245 IQD Protein Family AT2G33990 51.837 1.38e-76 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120834g00045 - - var:108341135 328.561