Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120833g00036 ATGAGGAACTGTGATGAATGGAAGCCTTTTGTAGTAATGGTAGCAATTGATTTTTGTTTTGCTGCAGTGAATGTTATTCTCAAGAAAGTTCTTGATGAAGGAATGAACCATTTGGTTTTTATCACATACAGATTATCAATTGCTACCATTCTCTTAGCTCCAATTGGATACTTTAGGGAAAGAAACAGTAGGCCAAGGCTCACATTTCGAGTTCTATGTTACCTCTTCTTCAGTGCCATTGTGGGGGCATCAGTGACACAATATTTCTTCCTTCTGGGGATCCAATATACTTCAGCTACCTTTGCTTGTGCATTCATCAACATGGTGCCTGTGATCACATTCATTATGGCATTACCATTCGGGTTAGAGAGCGTTAACATCAAGTGCAAGAGTGGGAGAGCCAAGATATTTGGGAGCTTGGTGTGCATAGGAGGGGCATTGTTGTTGACACTTTATAAAGGAAAGCCCTTGTTTCATGGGACTTCTTCTTCTTCTTATTCTTCAAGTAGAACATCAAGTGGGAGATCATGGAGCATTGGTGTTGTAGCTTTGATATTTGGAACACTGTTCTGGTCATCTTGGTACATATTACAATCAAGCATAAGCAAGAGGTTCCCATGTCAATACTCAAGCACAGCCATAATGACCTTGTTAGGAGCCATTCAAGCAGCTATCATAAGCTTCTCCACTCAAAACCATGACTTGTCTATTTGGGTTCTCAAGGGAAACCTTCCAATAATAGCTGTTCTGTTTTCTGGGATGATTGGATCAGGGTTATGCTTTGTGGGGATGTCATGGTGTGTGAAGAAAAGGGGTCCAGTGTTCACTGCAGCATTCAGCCCTCTTGTTCAGATCATGGCTGCCATCATTGATATCCCTTTCTTGCATGAGCAGCTACATCTTGGAAGTGTATTGGGATCGATCTTGGTGATGATGGGATTATACATTCTTCTGTGGGGTAAGAGCAAGGAGATTGAGAATCGTGTTAACAAGTTAGTCCAAGACCACGCTGAAGAAACCAAGGAACAAGATCCAGAAATACAACAACTTCCTGCACTTTCTTGTGATTCCCGGTGA 1077 0.4178 MRNCDEWKPFVVMVAIDFCFAAVNVILKKVLDEGMNHLVFITYRLSIATILLAPIGYFRERNSRPRLTFRVLCYLFFSAIVGASVTQYFFLLGIQYTSATFACAFINMVPVITFIMALPFGLESVNIKCKSGRAKIFGSLVCIGGALLLTLYKGKPLFHGTSSSSYSSSRTSSGRSWSIGVVALIFGTLFWSSWYILQSSISKRFPCQYSSTAIMTLLGAIQAAIISFSTQNHDLSIWVLKGNLPIIAVLFSGMIGSGLCFVGMSWCVKKRGPVFTAAFSPLVQIMAAIIDIPFLHEQLHLGSVLGSILVMMGLYILLWGKSKEIENRVNKLVQDHAEETKEQDPEIQQLPALSCDSR 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120833g00036 358 Pfam EamA-like transporter family 179 318 IPR000620 GO:0016020
Stsc120833g00036 358 Pfam EamA-like transporter family 13 149 IPR000620 GO:0016020
Stsc120833g00036 358 SUPERFAMILY Multidrug resistance efflux transporter EmrE 246 323 - -
Stsc120833g00036 358 PANTHER WAT1-RELATED PROTEIN 8 331 IPR030184 GO:0016020|GO:0022857
Stsc120833g00036 358 Coils Coil 322 342 - -
Stsc120833g00036 358 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120833g00036 Stsc-Chr120833 162597 164534 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120833g00036 6 326 Nodulin-like Gene Family AT1G11460 37.538 4.35e-83 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120833g00036 - - gmx:100803670 551.977