Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120833g00013 ATGGCCACTCTCTTCACAACTTGTTCATCATTACTTTTAGTTTCCTTCATCATTGTATTCTGTGTGCCATCAACAGTCAATTCCACTGAGTTTCAAGTTGGTGGTGACGACGGCTGGGTTGTTCCTACGTCCAAAAACGATGATCAAATCTACAACCAATGGGCTTCCCAGAACAGATTCAAAGTTGATGACACTCTTCGTTTCAAGTACTCTAAAGATTCGGTAATGGTGGTGAGTGAGGAGGAGTATGATAGCTGCAGATCCTCTAAGCCCCTGTTCTTCTTCAACAATGGTGACACTGTCTTCAAATTGGACCATCCGGGATTGTTCTACTTCATTAGTGGGGTTAGTGGGCACTGTGACAGAGGCCAGAAGATGATTGTGAAGGTTTTGGCGATACATGATAATCCACAGCCACAGCCACAACCAAAGCTACATTCAGAATCACCAGCACCAGCACCAGCACCTGCACCCTCTCTCTCTCATCATCATTCTCAAGCTGCAAGATCAATTCCTCTTTTCACCATAACCAACTTCCCACTACTCTTTCTTATCTTACCTTTTGCCATGTTTTTTGTTTGA 582 0.4381 MATLFTTCSSLLLVSFIIVFCVPSTVNSTEFQVGGDDGWVVPTSKNDDQIYNQWASQNRFKVDDTLRFKYSKDSVMVVSEEEYDSCRSSKPLFFFNNGDTVFKLDHPGLFYFISGVSGHCDRGQKMIVKVLAIHDNPQPQPQPKLHSESPAPAPAPAPSLSHHHSQAARSIPLFTITNFPLLFLILPFAMFFV 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120833g00013 193 Gene3D - 28 134 IPR008972 -
Stsc120833g00013 193 PANTHER BLUE COPPER PROTEIN 29 148 IPR039391 GO:0009055
Stsc120833g00013 193 Pfam Plastocyanin-like domain 47 124 IPR003245 GO:0009055
Stsc120833g00013 193 CDD OsENODL1_like 29 131 IPR041846 -
Stsc120833g00013 193 ProSiteProfiles Phytocyanin domain profile. 29 132 IPR003245 GO:0009055
Stsc120833g00013 193 SUPERFAMILY Cupredoxins 28 131 IPR008972 -
Stsc120833g00013 193 MobiDBLite consensus disorder prediction 143 157 - -
Stsc120833g00013 193 FunFam Early nodulin-like protein 1 28 135 - -
Stsc120833g00013 193 MobiDBLite consensus disorder prediction 138 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120833g00013 Stsc-Chr120833 69185 70328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120833g00013 11 131 Phytocyanin Superfamily AT3G18590 66.116 3.77e-59 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120833g00013 - - ahf:112718106 257.684