Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120833g00012 ATGGCGGACGTGGTTCCGAAGCAGCACATGAACAGCCCTACAACAACCAACAAAAAAGAGTCACCGTCGTCGTCGTCGTCGTCGTCGAGCCTCCTGCTAGGTCGATTTGAGGTCGGAAAACTCCTAGGCCATGGAACATTCGCGAAGGTGTACTGCGCAAAGAACGTGAAAACCGGAGAATGGGTGGCAATAAAGGTCATCGACAAAGAGAAGATCCTTAAAGGAGGCCTAGTGGCGCACATCAAGCGCGAGATCTCAATCCTCCGCCGCGTCCGCCACCCAAACATCGTTCAGCTATTCGAGGTAATGGCCACGAAAACCAAAATCTACTTCGTCATGGAATACGTCCGCGGCGGCGAGCTCTTCAACAAGGTTGCCAAAGGAAGGCTCAAAGAAGAAGTCGCCAGAAAGTACTTCCAGCAATTAATCTCCGCCGTCGGATTCTGTCACGAGAGAGGCGTCTACCACCGCGACCTCAAACCAGAGAATCTCCTCCTCGACGAGAACGGTAACCTTAAGGTCTCCGATTTCGGCCTCAGCGCCGTCTCCGATCAAATTCGCCAGGACGGTTTGTTCCACACGTTCTGCGGAACTCCGGCGTACGTCGCACCTGAGGTTCTCGGCCGGAAGGGATACGACGGCGCGAAAGTCGATCTGTGGTCATGCGGTGTCGTTTTGTTCGTTCTGATGGCAGGGTACTTGCCGTTTCACGATCAGATCGTGATGCAGATGTATAAGAAGATCTACAAAGGCGAATTCCGGTGCCCTAGGTGGTTCTCCCCTGATCTCGCCAAGCTCCTCTCCAGGCTCCTGGACACTAAGCCGGAGACGCGGATCGCCATTCCCGAAATCATGGAGAACAAGTGGTTCAAGAAAGGATTCAAACAGATCAAGTTCTACGTTGAAGACGATAGGCTCTGTAGCTTGGATGATGCTGAAAACATGATCATGGAGGATCATAATGTCAATAACATTATCAGCAGTAATCATCCTTCTAGCAACAGCATCAATGGCAATAACCTCGCAGACGATGAAACTGGTTCTGTATCGGATTACGCGGTTTCTGAATCTGACTCTGAGTTTGAGACGAAGAGAAGGCATAGCGTTAGCAGTGGCGCTTTGCCTCGGCCTGCGAGTTTGAATGCGTTCGACATCATATCCTTCTCGAAGGGATTCGATCTTTCTGGATTGTTCGAAGAGAAAGGGGACGAAGCTAGGTTTGTGACTTCGGCTCCGGTTGGGAAGATTATATCGAAATTGGAGGAGATTGCTCACTTGGTTAGATTCTCGGTGAGGAAGAAGGATTGCAGGGTGAGCTTGGAAGGAACGAGGGAAGGTGTTCGAGGTCCATTGACGATTGCTGCTGAGATATTCGAGTTGACACCGACGCTTGTGGTGGTTGAGGTGAAGAAGAAAGGAGGTGACAGAGCAGAGTATGAGAGGTTCTGCAACAATGAATTGAAGCCTGGATTGATGAACTTGATGAAGGAGGAAGAATCTTGTTCATCATCAAGTTTAAGTAGTGTTAATGCTTCTCCAGCAAATGGAATTAGCATTGGTTCTGGTTCTTCATCTTCTCATCATCATCCTCCTTCATTGCTACGTGTGCTTTCAGAGCCTGCACATAAGATATCTGCTGCTTTGGCTGAGTCTGCAGAGTATGTACCTTCGTCATCAGAGGCTTAA 1686 0.4958 MADVVPKQHMNSPTTTNKKESPSSSSSSSSLLLGRFEVGKLLGHGTFAKVYCAKNVKTGEWVAIKVIDKEKILKGGLVAHIKREISILRRVRHPNIVQLFEVMATKTKIYFVMEYVRGGELFNKVAKGRLKEEVARKYFQQLISAVGFCHERGVYHRDLKPENLLLDENGNLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLGRKGYDGAKVDLWSCGVVLFVLMAGYLPFHDQIVMQMYKKIYKGEFRCPRWFSPDLAKLLSRLLDTKPETRIAIPEIMENKWFKKGFKQIKFYVEDDRLCSLDDAENMIMEDHNVNNIISSNHPSSNSINGNNLADDETGSVSDYAVSESDSEFETKRRHSVSSGALPRPASLNAFDIISFSKGFDLSGLFEEKGDEARFVTSAPVGKIISKLEEIAHLVRFSVRKKDCRVSLEGTREGVRGPLTIAAEIFELTPTLVVVEVKKKGGDRAEYERFCNNELKPGLMNLMKEEESCSSSSLSSVNASPANGISIGSGSSSSHHHPPSLLRVLSEPAHKISAALAESAEYVPSSSEA 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120833g00012 561 FunFam Non-specific serine/threonine protein kinase 377 495 - -
Stsc120833g00012 561 SUPERFAMILY Protein kinase-like (PK-like) 32 291 IPR011009 -
Stsc120833g00012 561 SMART serkin_6 36 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc120833g00012 561 Pfam Protein kinase domain 36 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc120833g00012 561 Gene3D Kinase associated domain 1, KA1 375 496 - -
Stsc120833g00012 561 Gene3D Transferase(Phosphotransferase) domain 1 27 367 - -
Stsc120833g00012 561 CDD CIPK_C 381 491 - -
Stsc120833g00012 561 FunFam Non-specific serine/threonine protein kinase 27 115 - -
Stsc120833g00012 561 MobiDBLite consensus disorder prediction 8 30 - -
Stsc120833g00012 561 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 25 486 - -
Stsc120833g00012 561 Pfam NAF domain 377 433 IPR004041 GO:0007165
Stsc120833g00012 561 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672|GO:0006468
Stsc120833g00012 561 CDD STKc_SnRK3 35 289 - -
Stsc120833g00012 561 MobiDBLite consensus disorder prediction 347 373 - -
Stsc120833g00012 561 ProSiteProfiles NAF domain profile. 375 399 IPR018451 GO:0007165
Stsc120833g00012 561 ProSitePatterns Protein kinases ATP-binding region signature. 42 65 IPR017441 GO:0005524
Stsc120833g00012 561 ProSiteProfiles Protein kinase domain profile. 36 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc120833g00012 561 MobiDBLite consensus disorder prediction 1 30 - -
Stsc120833g00012 561 FunFam Non-specific serine/threonine protein kinase 26 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120833g00012 Stsc-Chr120833 64080 65765 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120833g00012 16 512 CBL-interacting serine-threonine protein kinases AT4G18700 72.435 0.0 738
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Stsc120833g00012 Pkinase 1.4e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120833g00012 - - adu:107468323 907.901