Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120833g00011 ATGAATAACTGCCCCAACCCCGTCGTTCACACCTTCTCTCAATTCTACCATAACTGGATCTGGAAGCTCCAACAGATCCTCCACCACCTTCTCCACGTCTCCACCAACCAGAATTCATACACATCAGAACAGGATCTTCGATCTCTCGTCTCTGACGTCACTACGCACTTGAAGGAGTACTACACCGTCAAATGGAGTTTGGCGCGAGACGACGTTCTTGTGTTCTTCTCCCCGGTTTGGCTGACGCCTCTCGAAAATGCGTACCTCTGGATCACCGGCTGGAAGCCTTCCACTGCCTTCAAGGTGCTGGAATCTCTCAAGAACAGCAACTTCTTCGGCATGACGGAGGAGCAGAAGAGGAAGATAGAGGAGCTGAGGATGAGGACGAAGATGGAGGAAGAGAAGGTTGAGAGGGAGATGGAGAGGCAGCAGGTTGCCATGGCGGATTGGAAGATCGTGGAGCTAGCCAAGCTCTCAAGCAGAGCCACACGGAACAAGAAGAAGAATAACAATGAAGAAGAAGAGAAGGTAGTGGTGGAGTTGGCGATGAAGAAGGTGTTTGGGGGATTGGAGAGAATAATGAAGGGTTCAGATTGTGTGAGGCTGAAGACGCTGAAAGGGGTATTAGATGTTCTTGAACCAATGCAGTGTGTACACTTCTTAGCTGCAAGTATCGCTATGCAGCTTCGTCTCAGGGAATGGGGGGACAAGTGCCATCTCATTCATCATGCCGGAGCCATCTTCAATTCACCCATCATCACAAAATCTGATGATTATACTATAATTAACTAG 792 0.4899 MNNCPNPVVHTFSQFYHNWIWKLQQILHHLLHVSTNQNSYTSEQDLRSLVSDVTTHLKEYYTVKWSLARDDVLVFFSPVWLTPLENAYLWITGWKPSTAFKVLESLKNSNFFGMTEEQKRKIEELRMRTKMEEEKVEREMERQQVAMADWKIVELAKLSSRATRNKKKNNNEEEEKVVVELAMKKVFGGLERIMKGSDCVRLKTLKGVLDVLEPMQCVHFLAASIAMQLRLREWGDKCHLIHHAGAIFNSPIITKSDDYTIIN 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120833g00011 263 Coils Coil 155 175 - -
Stsc120833g00011 263 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 11 237 - -
Stsc120833g00011 263 ProSiteProfiles DOG1 domain profile. 9 241 IPR025422 GO:0006351|GO:0043565
Stsc120833g00011 263 Pfam Seed dormancy control 32 104 IPR025422 GO:0006351|GO:0043565
Stsc120833g00011 263 Coils Coil 115 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120833g00011 Stsc-Chr120833 59828 60790 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120833g00011 33 232 bZIP Transcription Factor Family AT5G06960 27.000 2.22e-15 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120833g00011 - - gmx:100808459 301.212