Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120833g00002 ATGCCGGATTTCAACGATTCCGCTGCCCCTGCTCCGGCACCCAACCCTCGTCCCATGCCAGTCCGCGAGGACTGCTGGACCGAGGACGCTTCTGCCACCCTCGTCGACGCTTGGGGCCGCCGCTACCTTGAGCTTAACCGCGGCAACCTTCGTCAGAAGGATTGGCAGGACGTTGCCGACACCGTCAACGCTCTCCATGGCCACACGAAGAAGACTCATCGAACCGATGTTCAGTGTAAGAACCGAATCGACACCATTAAGAAGAAATACAAGGTGGAGAAGGCTAGGGTTACGGCCTCCAACGGTACCGTTTCGTCCTCGTGGCCGTTCTTCGAGAAATTGGACGCGTTGATTGGCCCTAACTTCAACGCTAAGAAGAATTCCTCTTCGCCGTCTCCGTCTCCTCCGGTGGCGCTCCCTTTGTTGCCGTATCGGAAGGCCTCTGTGCCGGCTGTTTCTCCCGTTACTGCTGTGCCGCCAGCCGCCTTGGCGCTGCCGCAGAAGCGGTCGGCGGCGGCAGCGATGGACGATGGGTACTTCAGGAGGAATTATTCGGCTATGGCAGCCGCTGCGGCTGCCGCGGAGGCCGATGAGGAGTTGGCCAAGGCAATAGAGAGGTTTGGGGAAGTGTATGAGAGAGTGGAAGCACAGAAGCTGAGGCAGATGGTGGATTTGGAGAAGCAGAGGATGCAGTTCGCTAAGGATCTCGAGGTGCAGAGGATGCAGATGTTTATGGACACGCAGGTTCAGTTGGAGAGGATTAAGCGTGGGAAGAGATCTGGGTCTAATGATATGTATAGCTAG 804 0.5721 MPDFNDSAAPAPAPNPRPMPVREDCWTEDASATLVDAWGRRYLELNRGNLRQKDWQDVADTVNALHGHTKKTHRTDVQCKNRIDTIKKKYKVEKARVTASNGTVSSSWPFFEKLDALIGPNFNAKKNSSSPSPSPPVALPLLPYRKASVPAVSPVTAVPPAALALPQKRSAAAAMDDGYFRRNYSAMAAAAAAAEADEELAKAIERFGEVYERVEAQKLRQMVDLEKQRMQFAKDLEVQRMQMFMDTQVQLERIKRGKRSGSNDMYS 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120833g00002 267 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 13 258 IPR044823 -
Stsc120833g00002 267 Gene3D - 26 92 - -
Stsc120833g00002 267 Pfam Myb/SANT-like DNA-binding domain 23 117 IPR044822 -
Stsc120833g00002 267 FunFam trihelix transcription factor ASIL2 26 92 - -
Stsc120833g00002 267 Coils Coil 186 206 - -
Stsc120833g00002 267 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120833g00002 Stsc-Chr120833 7596 11088 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120833g00002 199 266 Trihelix Transcription Factor Family AT3G14180 51.389 1.09e-16 77.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Stsc120833g00002 Myb_DNA-bind_4 1.8e-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120833g00002 - - gmx:100815241 415.231