Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120832g00027 ATGTCACCAAAGAATCAACAAGTGGCCAAATCTGAAATCCAGAAGCCTAGATGGCTTGATGCTTTCCTCGAAAAGAAGTTCTTTGAGCCGTGCGAGGATCATTCACGGCGCAAGAATGAGTTGAACAAATACTGTATAGACTGTGATCAGGCAGTTTGCGAACATTGCGTTTTATCAGGTCCTCATGATAAGCACATCATACTTAAGCTCTACAGACATATTTACAAAGATGTGGTCTCCATTGGTACTATGGATAAGTATATCGACTGCTCCGAAATTCAGCGCTACAAGTCCAACAAGCGATTGGTTATTTCTCTGAATCCGCTTCCGCACAGTGGTTCAGCACCAAACAATGAGGCATCATGCAACACCTGTTCTAGAAAGTTGAATGAACCGAATCAATATCGTTACTGCTCCATTTCTTGCAAGGTCAAGGCTATTTCGCCAGAACCTATTGATTTGGTACCTGCCATTATTCCTGACCAAAACCAGAAAGCTACTCAGGAAAAACAGGAGAATCCTTCTCAGGAAGGACAGGAGATTCCTACTCAGGAAAGACCAGAGGAAAAGGCTGAACCTGAAGTCCCAAGGCCAAGAAAGCGAAGAAGAAAGGGAACACCCCATAGAGCTCCATTCTTCTAA 642 0.4361 MSPKNQQVAKSEIQKPRWLDAFLEKKFFEPCEDHSRRKNELNKYCIDCDQAVCEHCVLSGPHDKHIILKLYRHIYKDVVSIGTMDKYIDCSEIQRYKSNKRLVISLNPLPHSGSAPNNEASCNTCSRKLNEPNQYRYCSISCKVKAISPEPIDLVPAIIPDQNQKATQEKQENPSQEGQEIPTQERPEEKAEPEVPRPRKRRRKGTPHRAPFF 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120832g00027 213 ProSiteProfiles Zinc finger B-box type profile. 31 70 IPR000315 GO:0008270
Stsc120832g00027 213 MobiDBLite consensus disorder prediction 162 181 - -
Stsc120832g00027 213 MobiDBLite consensus disorder prediction 162 213 - -
Stsc120832g00027 213 Pfam PLATZ transcription factor 72 144 IPR006734 -
Stsc120832g00027 213 SUPERFAMILY B-box zinc-binding domain 31 70 - -
Stsc120832g00027 213 CDD Bbox2 31 70 - -
Stsc120832g00027 213 Gene3D Classic Zinc Finger 25 70 - -
Stsc120832g00027 213 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 9 212 - -
Stsc120832g00027 213 MobiDBLite consensus disorder prediction 182 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120832g00027 Stsc-Chr120832 212331 215183 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Stsc120832g00027 PLATZ 1.9e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120832g00027 - - adu:107457969 317.775