Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120832g00026 ATGGTGGAGTTATGTCGATGGCTGAGTTACTTCCACGGAAAGCCAACATGGAAGCAACACCATAAAGTCTTAGCAAGAGATGGAATGAGCTACATGGTGCCCATATATGAAGGGTATGCACTTCCCCTTACAATTCTTTGGTTGGACCTTGCAGGTCGTGATTTGACAGAGTACTTGGTGAAAATCCATACTGAGAGAAGGTACTCCTTCAAAACCTCTACTGAGAAGAAAATTGTCCGAGATGTGAAGGAGAAGCCTACCGACAGGTTTCAGGCCAGACCAGGCCAGGCTTGA 294 0.4626 MVELCRWLSYFHGKPTWKQHHKVLARDGMSYMVPIYEGYALPLTILWLDLAGRDLTEYLVKIHTERRYSFKTSTEKKIVRDVKEKPTDRFQARPGQA 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120832g00026 97 PANTHER ACTIN 27 85 IPR004000 -
Stsc120832g00026 97 SUPERFAMILY Actin-like ATPase domain 27 85 IPR043129 -
Stsc120832g00026 97 Pfam Actin 29 85 IPR004000 -
Stsc120832g00026 97 Gene3D Actin; Chain A, domain 4 52 85 - -
Stsc120832g00026 97 Gene3D - 27 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120832g00026 Stsc-Chr120832 207064 208823 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120832g00026 27 85 Cytoskeleton Gene Families AT3G12110 76.271 4.07e-24 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120832g00026 - K05692 gmx:100778206 94.3597