Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120832g00023 ATGCATTCTCCTTCTCTCAAGGGTCCTCACCATGGCCACGAGATACTCAAGGTCTGGAAATATATGTATGAAGATACTGTCTCTCTTGATGATATGAATAAGTACTTTGACTGCTCAGAAATCCGGCCCTACACATGCAATGGCCAAAAAGTTATTCATCTAGATCCTCTCACATGCTGTGATCCGAGGTCATGCAAAATCAGCCCTCAAAAGTTAAGTGGTGAGACTATAAAGTATCTCTACTGCTCCATTTCTTGCAAGGTCGAAAAGTTGGTCCCTGCTGTCATTCCTGATGAGAATCAGAATGCTCCTGAGGAAAGACAGGAGAATCCTCCTCAGGAAGGACAGGAGACTCCTCCTCTGCAAAGACAGGAGGAAAATCCTAAACCTGTGAGTTTCCGAAAGAGAAGCAGGAAGGGAACACCCCATAGAGCACCCTTTTTCTAA 447 0.4474 MHSPSLKGPHHGHEILKVWKYMYEDTVSLDDMNKYFDCSEIRPYTCNGQKVIHLDPLTCCDPRSCKISPQKLSGETIKYLYCSISCKVEKLVPAVIPDENQNAPEERQENPPQEGQETPPLQRQEENPKPVSFRKRSRKGTPHRAPFF 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120832g00023 148 Pfam PLATZ transcription factor 20 88 IPR006734 -
Stsc120832g00023 148 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 10 147 - -
Stsc120832g00023 148 MobiDBLite consensus disorder prediction 97 148 - -
Stsc120832g00023 148 MobiDBLite consensus disorder prediction 106 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120832g00023 Stsc-Chr120832 199345 201204 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Stsc120832g00023 PLATZ 7.7e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120832g00023 - - adu:107457969 122.094