Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120832g00017 ATGGCTATTATCAACCGAAGATTGAAACTAATAAAAGCAGGGGAGCCTACAAACAATGACTTGTTGGGCATACTTTTGGAATCAAATCACAAGGCAGAATCTGAGAAAAACAGCAGTGGTGGAATGAGTTTAAGAGACGTTGTGGAAGAAGTGAAACTGTTTTACTTAGCTGGGCAGGAAGCCAATGCAGAGTTGCTAGTGTGGACCATGTTATTGCTAAGCAAGCATCCTGATTGGCAAGCAAAGGCCAGGGAGGAAGTTTTTCAAGTCTTTGGAAATGAAAAGCCAGACTACGAGAAGCTAGGGCAACTCAAGATTGTGCCAATGATTCTACAAGAGAGCCTGAGGTTATATCCACCGGTGGTTATGTTCGCTAGATTCCTACGCAAAGATGCAAAGCTCGGAGAGCTCACAATTCCAGCAGGAGTGGAACTTGTAGTGCCCATATCAATGCTACACCAAGATAAGGAATTTTGGGGCGATGATGCAAAGGAGTTCAAGCCAGAGAGGTTTGCTGAAGGAGTATCAAAGGCAACAAATGGTAAACTTTCATACATGCCATTTGGATGGGGTCCTAGACTCTGCATTGGCCAAAACTTTGGATTGTTAGAGGCTAAGATTGCTGTCTCCATGATCTTGCAACGTTTCTCATTTGAGTTGTCTCCTTCTTATACTCATTCTCCTTCCTTTATTATTACACTTCAGCCAGAGCGTGGGGCACACCTAATGTTACAAAAATTGTAA 744 0.4301 MAIINRRLKLIKAGEPTNNDLLGILLESNHKAESEKNSSGGMSLRDVVEEVKLFYLAGQEANAELLVWTMLLLSKHPDWQAKAREEVFQVFGNEKPDYEKLGQLKIVPMILQESLRLYPPVVMFARFLRKDAKLGELTIPAGVELVVPISMLHQDKEFWGDDAKEFKPERFAEGVSKATNGKLSYMPFGWGPRLCIGQNFGLLEAKIAVSMILQRFSFELSPSYTHSPSFIITLQPERGAHLMLQKL 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120832g00017 247 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 238 - -
Stsc120832g00017 247 Pfam Cytochrome P450 3 236 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120832g00017 247 PRINTS P450 superfamily signature 109 120 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120832g00017 247 PRINTS P450 superfamily signature 195 206 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120832g00017 247 PRINTS P450 superfamily signature 57 74 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120832g00017 247 PRINTS P450 superfamily signature 186 195 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120832g00017 247 SUPERFAMILY Cytochrome P450 2 245 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120832g00017 247 Gene3D Cytochrome P450 1 247 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120832g00017 247 PRINTS E-class P450 group I signature 46 63 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120832g00017 247 PRINTS E-class P450 group I signature 66 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120832g00017 247 PRINTS E-class P450 group I signature 185 195 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120832g00017 247 PRINTS E-class P450 group I signature 195 218 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120832g00017 247 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 188 197 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120832g00017 Stsc-Chr120832 171963 173471 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120832g00017 2 247 Cytochrome P450 AT3G14680 62.195 1.65e-107 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120832g00017 - K24179 ahf:112764706 451.825