Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120831g00077 ATGGCAATTGGTTCATCAATGAAGGGCCTTGTAGCCCTTCTTGTTGTTGTTATTGTAATGAGTTCATCATCATTTGAAGCATCAGCATCAACATACAATGTTGGTGGCAAAAATGGTGGCTGGGTTGTGAATCCGAAAGAGAATTATACTCTCTGGTCTCAGCGTTACACCTTCCGAGTCAACGATTATCTCTATTTCAAGTACGAGAGAGGAAAAGATTCAGTTCTGATTGTGAGCATAGAAGATTACGATTCATGCAACACGGCGAAACCGTTACACAGGTTCAGAGGTGGAAGATCTGGATCTACGGTTCAACTGAATAAGCCCGGTCCGTTCTATTTCATCAGCGGTAACCAACAAAACTGCCAGAAAGGCCAGAAGTTCGCCGTTAACGTCGTCTCCGCCGCGAATCCTCCCTCGCCGACGCCACATCCTTCTCCCGCGCCATCGCCGCCACATCCTTCTCCCGCGCCATCATCCCCGCCGCCTCATCATCCACCTTCCGGGGGAATGCCAGCTTCCCCTGCGGATTTGAGTCCGGTTCATGCTCCGGCGCCGGGCCCGGCTCGGAACGGTGGTTCTTCTAGGTCTTTTGGTGTGGGTTTTGGAGTAATTAGCCTTGTGGTGGCGTTATTATCGTTCTAA 645 0.5039 MAIGSSMKGLVALLVVVIVMSSSSFEASASTYNVGGKNGGWVVNPKENYTLWSQRYTFRVNDYLYFKYERGKDSVLIVSIEDYDSCNTAKPLHRFRGGRSGSTVQLNKPGPFYFISGNQQNCQKGQKFAVNVVSAANPPSPTPHPSPAPSPPHPSPAPSSPPPHHPPSGGMPASPADLSPVHAPAPGPARNGGSSRSFGVGFGVISLVVALLSF 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120831g00077 214 PANTHER BLUE COPPER PROTEIN 26 147 IPR039391 GO:0009055
Stsc120831g00077 214 MobiDBLite consensus disorder prediction 134 196 - -
Stsc120831g00077 214 SUPERFAMILY Cupredoxins 29 133 IPR008972 -
Stsc120831g00077 214 FunFam Early nodulin-like protein 1 29 137 - -
Stsc120831g00077 214 ProSiteProfiles Phytocyanin domain profile. 30 134 IPR003245 GO:0009055
Stsc120831g00077 214 MobiDBLite consensus disorder prediction 138 170 - -
Stsc120831g00077 214 Pfam Plastocyanin-like domain 41 126 IPR003245 GO:0009055
Stsc120831g00077 214 Gene3D - 28 137 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120831g00077 Stsc-Chr120831 467943 468929 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120831g00077 7 191 Phytocyanin Superfamily AT5G53870 44.324 1.34e-39 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120831g00077 - - adu:107462217 222.631