Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120831g00074 ATGAAGGACCTCTACTCCAAACTCAACTCTCTTCTCCCAAGCTATAGCCCTACGGAAGTGTTGCCATTGCCGGATCAAATAGACGAGGCTGTGAAATACATCAAAAGCTTGGAGAAGAAGGTGAAGACGGAGAAGGAGAAGAAGGAGAGGTTGTTAATGGGGAGGAATAATAACAAGAGATCTCGTGGTAGCTTCGATGAAAACAATAATGTTACAGAATCTGCAAAGATAGATGTTCATGAAATTGGTAATTCGTTGCTACAAGTGGTTTTGACATGCGGGTTTCAGAATAAGTTCCTTTTCAATGAGATTATTCGCATATTGCATGAAGAGAAGGTTGAGGTTGTTAGTGCCAATTATTCTTCACAACCTGGAGATTCAATGATTCATGTTTTGCATGCAGAGATTCCTTCGGCATTGCAGCAATTTGGAGCGGCAAGAGTGAGTGAGAGATTGAAAAGGTTTGTGAATGGATCAATCAGTGATGTGGAAATAGAGCCAGGGTTTTGGGATGATTTTGAAATTGATACTCAGATTTGGGAGCTTCCAGATCTTTCATCAGTAGTGAGCAAGGGTTTTCCAAATCATCCTTTGTAA 597 0.407 MKDLYSKLNSLLPSYSPTEVLPLPDQIDEAVKYIKSLEKKVKTEKEKKERLLMGRNNNKRSRGSFDENNNVTESAKIDVHEIGNSLLQVVLTCGFQNKFLFNEIIRILHEEKVEVVSANYSSQPGDSMIHVLHAEIPSALQQFGAARVSERLKRFVNGSISDVEIEPGFWDDFEIDTQIWELPDLSSVVSKGFPNHPL 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120831g00074 198 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 37 IPR011598 GO:0046983
Stsc120831g00074 198 MobiDBLite consensus disorder prediction 45 68 - -
Stsc120831g00074 198 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 1 156 - -
Stsc120831g00074 198 Coils Coil 27 54 - -
Stsc120831g00074 198 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 1 54 IPR036638 GO:0046983
Stsc120831g00074 198 MobiDBLite consensus disorder prediction 45 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120831g00074 Stsc-Chr120831 437549 438477 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120831g00074 1 158 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 36.747 1.30e-23 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120831g00074 - - aip:107610492 218.394