Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120831g00067 ATGAAACACAGGAATTTGGTTGGTTTCAGAGGATGGAGCAAAAGAAAAGGAGGGAAATTGATCCTTGTATATGATTATATGGTGAATGAGAGCTTGGATAAGAGGATTTTCGAGTGTGAAGATGATACCATGATGCTGATCTGGGAACTCAGGCTCAGTGTGCTTCAAAATGTAGCTTGTGGAATTTTGTACCTGCATGAAGGCTGGGAATTCGAGGTCTTGCATAGAGATATTAAAGCTAGTAATGTACTACTCGACAAGGATATGAACGCAAGATTGGGAGATTTCGGCCTAGCCAGGCTGCATCGACAGGAAAACGTTGCTGACACTACAAGAGTGATTGGAACTCTGGGCTACATGGCACCAGAGCTAGTCCGAATGAGTCGACCATCAACCGCTACCGATGTGTATAGTTTCGGAATATTGGTCCTGGAAGTGGTGTGTGGGAGAAGGCCTATTGTGGTAGATCAGCCTGCATTGGTTGATTGGGTATTTTCACTTATGGAGAAAGGGCAATTGAGTTTGGCCATTGATGAGAGGCTGAAGAATCAAAGTGGTTTCAGAACTGAGGAAGCTGAGAGAGTGTTGCATTTGGGTTTGTTATGTGCAAGTTCAGACCCTGGTATTAGGCCAGCAATGAGGCAAGTGGTGAAGGTTTTGGAAGGAATAAGAAACGGTGATTGTAATGATGCAAGCATCAGTATGAGTCTTCTTGGGAAAATAAACTCAGCAGCATCATGGTCTAGGAGTTCAACAAGTTCTGCCACTGTGAATTATCCTACTTTTGATGAAATTTTGCAAACTAAGTTCTATTCAACAGCATCTCAAAGCATCTCTTATCCAAGCCTACAGCCAAATTCTGGATCACTCTCATCAGAAGGAAGATGA 888 0.4302 MKHRNLVGFRGWSKRKGGKLILVYDYMVNESLDKRIFECEDDTMMLIWELRLSVLQNVACGILYLHEGWEFEVLHRDIKASNVLLDKDMNARLGDFGLARLHRQENVADTTRVIGTLGYMAPELVRMSRPSTATDVYSFGILVLEVVCGRRPIVVDQPALVDWVFSLMEKGQLSLAIDERLKNQSGFRTEEAERVLHLGLLCASSDPGIRPAMRQVVKVLEGIRNGDCNDASISMSLLGKINSAASWSRSSTSSATVNYPTFDEILQTKFYSTASQSISYPSLQPNSGSLSSEGR 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120831g00067 295 FunFam L-type lectin-domain containing receptor kinase S.4 27 232 - -
Stsc120831g00067 295 PANTHER - 1 224 - -
Stsc120831g00067 295 ProSitePatterns Serine/Threonine protein kinases active-site signature. 73 85 IPR008271 GO:0004672|GO:0006468
Stsc120831g00067 295 Pfam Protein kinase domain 1 218 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc120831g00067 295 ProSiteProfiles Protein kinase domain profile. 1 223 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc120831g00067 295 SUPERFAMILY Protein kinase-like (PK-like) 2 221 IPR011009 -
Stsc120831g00067 295 Gene3D Transferase(Phosphotransferase) domain 1 27 238 - -
Stsc120831g00067 295 SMART serkin_6 2 223 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120831g00067 Stsc-Chr120831 379702 380780 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120831g00067 1 222 Receptor kinase-like Gene Family AT3G53810 53.744 8.21e-72 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Stsc120831g00067 Pkinase 4.4e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120831g00067 - - vum:124844866 453.751