Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120831g00061 ATGGCGTCTACATCATCCGGTCGCGGCTCCAAGGGCTTCGATTTCGCTTCTGACGACATCCTCTGCTCCTACGAAGACTTCCCCAACCAGGACCCTTCTAACGGCACTCACGATGACCCCGCCAAGGATTTTCACAAATCAAGGATGGCAAGGACATCAATATTTCCTGATACTGCTTATAATTCGCCTGAAGATTCTGTAAGCCAAGATATGATTGCAGCTGTGGAGAAGAGCATGAAAAAAAATGCTGACAACCTGATGCGGTTTCTTGAAGGAATTAGTTCAAGGCTATCACAGTTGGAATTATATTGTTACAATATTGACAAATCAATTGGAGAAATGCGATCTGAATTAAACACTGACCATGGGGAGGCGGATATAAAGCTCAATTCTCTTGAGAAATACGTTCAGGAAGTACACAGATCTGTACAAATTTTGAGAGACAAGCAAGAGCTAGCTGATACTCAGAAGGAGTTAGCCAAGCTTCAGCTTGCTCAGAAAGAGTCATCCTCCACTAGCCATTCACATTCCAATGAGGAGAGGTCTTCGCCTTCTGCCACTGATCCAAAAAGGAACGACAAGGCATCTGACTCACATAACCAGCAGTTAGCTCTTGCCCTGCCTCATCAAGTTGCCCCACCGCAACAGCCTGTGGCACCACTCCCAGCCCCTGCTCCAGCTCCGGCCCCAAATGTAGCACCAGTCACTCAACAACCATCTTATTACATTCCACCCACTCCTTTGCCCAACCCGCCATCTGTGGCCCAAGTTCCTCAGAATCAATATTTGCCCTCTGATCAGCAGTATAGAACTCCACAACCAACATCATCGCAAGCAACTCAATCTCTGCCTACGCAACAATATTCTCAGTATCAGCAACCACAGCCTTCACAGCAGCATTGGCCTCAGCAGGTGCAACCTCAACAACCACCCTCAATGCAGTCACAAATGAGACCCCCTTCATCCAATGTTTACACTCCTTACCTGCCAAGCCATGCTACAAATCCCTCTCCCTCGGAAACAATACCGAACAGCATGCCAATGCAAATGCCATATTCTGGAATTCCACCTGCAGCTTCTGGCCGCAGCGATGCCATGCCGTATGGATACAATGGAGCTGGTAGAACAGTTCCACAGCAACCACTTCCCCCTCAAATCAAGGGCTCTTTTCCAGCACAACCAGGTGATCCATATGGAACTAGTGCTACTCATGTCTCACACCCTCCTACCAGTGCATACATGATCTATGATAATGAAGGAGGAAGAACACATCCTCCCCCACAACCTTCTCATTTTGCTCAAGCTGGATACCCCCCATCGAATGCTTTGCTTCAGAACCCTGCACCGCATAACCCCATGGGCCGGAATCCTAGCCAGACACAATATATTCGTGGCCATCCCTACAGCGACTTGATTGAGAAGTTGGTGAACATGGGATTTAGAGGTGATCATGTGGCTGGAGTGATCCAGAGGATGGAGGATAGTGGGCTGCCTATAGATTTTAACTCGGTACTTGACCGGTTGAATGTGCATAGTTCTGTTGGTCCCCAGAGGGCATGGTCAGGGTAA 1569 0.4825 MASTSSGRGSKGFDFASDDILCSYEDFPNQDPSNGTHDDPAKDFHKSRMARTSIFPDTAYNSPEDSVSQDMIAAVEKSMKKNADNLMRFLEGISSRLSQLELYCYNIDKSIGEMRSELNTDHGEADIKLNSLEKYVQEVHRSVQILRDKQELADTQKELAKLQLAQKESSSTSHSHSNEERSSPSATDPKRNDKASDSHNQQLALALPHQVAPPQQPVAPLPAPAPAPAPNVAPVTQQPSYYIPPTPLPNPPSVAQVPQNQYLPSDQQYRTPQPTSSQATQSLPTQQYSQYQQPQPSQQHWPQQVQPQQPPSMQSQMRPPSSNVYTPYLPSHATNPSPSETIPNSMPMQMPYSGIPPAASGRSDAMPYGYNGAGRTVPQQPLPPQIKGSFPAQPGDPYGTSATHVSHPPTSAYMIYDNEGGRTHPPPQPSHFAQAGYPPSNALLQNPAPHNPMGRNPSQTQYIRGHPYSDLIEKLVNMGFRGDHVAGVIQRMEDSGLPIDFNSVLDRLNVHSSVGPQRAWSG 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120831g00061 522 MobiDBLite consensus disorder prediction 163 180 - -
Stsc120831g00061 522 MobiDBLite consensus disorder prediction 255 343 - -
Stsc120831g00061 522 Coils Coil 145 165 - -
Stsc120831g00061 522 MobiDBLite consensus disorder prediction 24 48 - -
Stsc120831g00061 522 MobiDBLite consensus disorder prediction 240 254 - -
Stsc120831g00061 522 MobiDBLite consensus disorder prediction 212 343 - -
Stsc120831g00061 522 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 5 522 - -
Stsc120831g00061 522 MobiDBLite consensus disorder prediction 163 199 - -
Stsc120831g00061 522 Pfam UBA-like domain (DUF1421) 468 512 IPR010820 -
Stsc120831g00061 522 MobiDBLite consensus disorder prediction 181 197 - -
Stsc120831g00061 522 MobiDBLite consensus disorder prediction 213 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120831g00061 Stsc-Chr120831 336134 339514 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120831g00061 52 220 Trihelix Transcription Factor Family AT5G14540 33.136 3.51e-23 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120831g00061 - - aip:107610486 812.757