Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc120831g00049 | ATGGATGAATCTACTAATAAGCACAACAACAGTGGCACCAAGTTCAGGAACATGGGTGTGGATGATGACACTGGTGCACACAAGGTTTTCGATGAAATGAATGATCCAACCTTTTTTCAGAGCCATCATCAATGGAAGCCAGTTTTTGATGAAGCTTCCCTCTTACATAACAGGCCTCTCAAGAAGATTCGAAGCCCTCAACGTTCTTCTTCTTCTTCTTCTTCTTCACTTCAACAACCTCTTCCTTCTCCTTCTTCCTCCTCTGTTCCTCCATCTTCATCATCATCAAGAATAGTGTTTCCTTTTGCATTTGATCCCTCACAACAAAACCCGATGCAAATGCAAATGCAGTTCCCTTTCATGCACCCACCCATTCAACCAACAACAACACAGAACCAAATGATATCTTTCGCTTCTCAATCTCATCAACCTCAACATCAACACAACATGAACATGAACACAGTGTATCAACCTCAAATGCTACAACAACAACAACAACAGAATCAGCAGCAAATTCTTCAGTATTGGAGCGAAGCACTGAACCTTAGTCCAAGAGGGAGAATGATGATGATGAACAACAGGTTAAGGCCACCACCCCCACAGCCCTTGAACACGACCAAGCTCTATAGGGGTGTGAGGCAACGTCATTGGGGGAAATGGGTAGCTGAGATTCGTCTACCTCGAAACAGGACTCGGCTCTGGCTTGGCACCTTTGACACTGCAGAAGATGCTGCCATGGCCTATGATCGTGAGGCTTTCAAGCTTAGAGGTGAGAATGCACGCCTCAATTTCCCTGAACTCTTCCTCAACAAAAAGGAAGAAGAAGAAGCACCTTCTGATGCTCCTACTACTTCATCTCCTTCCTCTTCCATTACAACAACAAAGCAAGTTGAAGAGGTTTCTGAAGGTGGGAATGCCAATGTGGAGAAGAGTCCAATAGAAGAGGGTAATGAGAATGAGAATGAAGGAGGTGGTGGTGGTGGTGAAGGGGTTTCTCAAGAGCTGGTGTGGGGAGAGATGTCTGCATGGTTTAATGCTATTCCTTCAGGTTGGGGTCCAGGTAGTCCTGTTTGGGATGATTTGGACACTTCCAACAATAATTTTCTTTTGCAATCTCACATTCCTCCTTTTGCTCTCAACAACTCAAATCAGAACCAACAACAACAAGATGGATTCAATGACAATGATGCTGCTGATGATGTTCATATACAACAGGATTGA | 1221 | 0.4414 | MDESTNKHNNSGTKFRNMGVDDDTGAHKVFDEMNDPTFFQSHHQWKPVFDEASLLHNRPLKKIRSPQRSSSSSSSSLQQPLPSPSSSSVPPSSSSSRIVFPFAFDPSQQNPMQMQMQFPFMHPPIQPTTTQNQMISFASQSHQPQHQHNMNMNTVYQPQMLQQQQQQNQQQILQYWSEALNLSPRGRMMMMNNRLRPPPPQPLNTTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAAMAYDREAFKLRGENARLNFPELFLNKKEEEEAPSDAPTTSSPSSSITTTKQVEEVSEGGNANVEKSPIEEGNENENEGGGGGGEGVSQELVWGEMSAWFNAIPSGWGPGSPVWDDLDTSNNNFLLQSHIPPFALNNSNQNQQQQDGFNDNDAADDVHIQQD | 406 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc120831g00049 | 406 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 | 22 | 361 | - | - | |
Stsc120831g00049 | 406 | CDD | AP2 | 207 | 267 | IPR001471 | GO:0003700|GO:0006355 | |
Stsc120831g00049 | 406 | Pfam | AP2 domain | 209 | 257 | IPR001471 | GO:0003700|GO:0006355 | |
Stsc120831g00049 | 406 | Gene3D | AP2/ERF domain | 208 | 266 | IPR036955 | GO:0003700|GO:0006355 | |
Stsc120831g00049 | 406 | MobiDBLite | consensus disorder prediction | 57 | 95 | - | - | |
Stsc120831g00049 | 406 | MobiDBLite | consensus disorder prediction | 280 | 301 | - | - | |
Stsc120831g00049 | 406 | FunFam | Ethylene-responsive transcription factor 2 | 207 | 266 | - | - | |
Stsc120831g00049 | 406 | MobiDBLite | consensus disorder prediction | 376 | 394 | - | - | |
Stsc120831g00049 | 406 | SMART | rav1_2 | 208 | 271 | IPR001471 | GO:0003700|GO:0006355 | |
Stsc120831g00049 | 406 | MobiDBLite | consensus disorder prediction | 273 | 332 | - | - | |
Stsc120831g00049 | 406 | SUPERFAMILY | DNA-binding domain | 208 | 266 | IPR016177 | GO:0003677 | |
Stsc120831g00049 | 406 | MobiDBLite | consensus disorder prediction | 64 | 95 | - | - | |
Stsc120831g00049 | 406 | MobiDBLite | consensus disorder prediction | 376 | 406 | - | - | |
Stsc120831g00049 | 406 | ProSiteProfiles | AP2/ERF domain profile. | 208 | 265 | IPR001471 | GO:0003700|GO:0006355 | |
Stsc120831g00049 | 406 | PRINTS | Ethylene responsive element binding protein signature | 231 | 247 | IPR001471 | GO:0003700|GO:0006355 | |
Stsc120831g00049 | 406 | PRINTS | Ethylene responsive element binding protein signature | 209 | 220 | IPR001471 | GO:0003700|GO:0006355 | |
Stsc120831g00049 | 406 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc120831g00049 | Stsc-Chr120831 | 275934 | 277751 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc120831g00049 | 98 | 360 | AP2-EREBP Transcription Factor Family | AT2G20880 | 50.370 | 6.63e-63 | 204 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-ERF | Stsc120831g00049 | AP2 | 2.6e-13 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc120831g00049 | - | - | gmx:100101898 | 307.76 |