Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120831g00030 ATGAGTGGAATAGATTCATTTTCAATGCCATCTCCACCCCCACCACCACCACCTCCACCGCCGCTTGCTGAGAGGGTGATTGTTGAGCCAGCTAAATTCCATGCAGAGGCTAACACCAAGCCTTCCAAAAAACGTCCAGATCTTCCCACTTTTGCAAAATCTTTCACCATTGCATCCCTTCAACAGTATACAAATAGCTTTTCTCAAGAGAATCTTATAGGAATGGGCATGCTGGGGAGCGTGTATAGGGCCGAGCTTCCTAATAGGAAGATACTTGCTGTCAAGAAACTAGACAGGAGAGTTTCTGATCACCTGAAGGACGACGAGTTTCTTGAATTGATAAATGGTATTGACAAAATCCGGCATGCAAATATTGTTGAACTCATTGGATACTGTGCTGAGCATGGCCAAAGGCTTCTGATTTATGAGTACTGCAGTAACGGTTCGCTCCAGGATGCAATCCATTCAGATGATGAATTTGGAACAAGATTGTCATGGAATACTCGTATTCGGATAGCACTTGGAGCTGCTAGGGCCTTAGAGTATTTGCATGAGCAATGTCAGCCACCAATTGTGCACAGAAATTTCAAGTCTGCTAACATTCTCCTTGATGATGATCTATCCGTCCGGGTCTCTGAATGTGGTTTGGCTCCATTAATAACTTCAGGTTCTGTAAGTCAGCTCTCAGGACAACTGCTAACTGCTTATGGCTACGGGGCTCCGGAATTCGAGTCAGGAATTTACACCTACCAGAGTGATGTATACAGCTTTGGAGTGGTTATGTTAGAACTTCTGACCGGCCGACAGTCCTATGACAGGACGCGTCCTCGAGGGGAGCAGTTTCTGGTGAGATGGGCAATTCCTCAACTTCATGATATTGATTCATTATCAAGGATGGTAGATCCTTCTCTAAATGGAGAATACCCTGCAAAATCATTGTCGAATTTCGCAGACATTATTTCTCGATGTGTTCAGTCAGAGCCAGAATTCAGGCCAGCAATGTCAGAGGTAGTCTTGTACTTGCTAAACATGATAAGGAGGGAATCTCAGCAATCCGAATCAACCGTAAAATAA 1074 0.4441 MSGIDSFSMPSPPPPPPPPPPLAERVIVEPAKFHAEANTKPSKKRPDLPTFAKSFTIASLQQYTNSFSQENLIGMGMLGSVYRAELPNRKILAVKKLDRRVSDHLKDDEFLELINGIDKIRHANIVELIGYCAEHGQRLLIYEYCSNGSLQDAIHSDDEFGTRLSWNTRIRIALGAARALEYLHEQCQPPIVHRNFKSANILLDDDLSVRVSECGLAPLITSGSVSQLSGQLLTAYGYGAPEFESGIYTYQSDVYSFGVVMLELLTGRQSYDRTRPRGEQFLVRWAIPQLHDIDSLSRMVDPSLNGEYPAKSLSNFADIISRCVQSEPEFRPAMSEVVLYLLNMIRRESQQSESTVK 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120831g00030 357 PANTHER OS01G0253100 PROTEIN 44 349 - -
Stsc120831g00030 357 MobiDBLite consensus disorder prediction 1 24 - -
Stsc120831g00030 357 PIRSF ILK 27 356 - -
Stsc120831g00030 357 Gene3D Transferase(Phosphotransferase) domain 1 145 357 - -
Stsc120831g00030 357 Gene3D Phosphorylase Kinase; domain 1 30 144 - -
Stsc120831g00030 357 Pfam Protein tyrosine and serine/threonine kinase 70 339 IPR001245 GO:0004672|GO:0006468
Stsc120831g00030 357 ProSiteProfiles Protein kinase domain profile. 67 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc120831g00030 357 SUPERFAMILY Protein kinase-like (PK-like) 46 341 IPR011009 -
Stsc120831g00030 357 SUPERFAMILY Formin homology 2 domain (FH2 domain) 12 21 - -
Stsc120831g00030 357 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 32 144 - -
Stsc120831g00030 357 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 145 355 - -
Stsc120831g00030 357 MobiDBLite consensus disorder prediction 8 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120831g00030 Stsc-Chr120831 155247 156916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120831g00030 16 352 Strubbelig Receptor Gene Family AT4G03390 76.558 1.81e-179 515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Stsc120831g00030 PK_Tyr_Ser-Thr 1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120831g00030 - - gmx:100811490 591.267