Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120831g00010 ATGGCTGCTAAGACCAACAACCATCATGAGGTGAACATCATAGAACAGTCTCAAGTTGCTCCACCGCAAGGATCTCTGCCTTCGAAAACACTGTCCTTCACTTTCTTCGACATTCCATGGTTCTTATGCCACCCGGTCAAGCGCATCTTCTTCTATCACTTCCCTTACTCTACTAACCACTTCCTTCAATCTTCACTCCCTCCTCTCAAACACTCTCTTTCCCTCACTCTTCAACACTTCTTCCCTTTCGCCTCCAAACTCATCGTTCCTCCACAACCCCAACAACCTTTCATAGCCTATCACCAAGGTAGCGACTCGATTAATTTAACGGTTGCGGAGTCCAAAGCTGATTTCAACGTTCTTGTATCTGATTTACCACAAGATGCTAGAGATTGGCACCCTTTGATTCCTTCTTTGCCTCCAGAAGTTACCTTAGAGAATGGCACTCGTGTGATTCCTCTTATGGCGATTCAACTCACTATCATACCCAATTCTGGATTCTCTATCTCTCTCACTTTCAACCACCTTGTTGCAGATGGCAAGTCTCTTCATCATTTCATCAAGTTTTGGGCCAAACTTTGCAACCACATAGTAACAAATGGAGGTAATAACTTAGGCTCCTTTGTTGAAGGGTCTAATGGTAATTTACCCTTACCTTCTCATGATAGAGGCAAAGTTAAGGACCCAAAAGGGCATATGCAAGTTTACTTGGAAGACCTCAGAAATTCTGATTTTCAGAGCATGAAATTTCGAGGGCTTGTCAATGATGCTTCTACCGACAAGGCACGTGGCACGCTCGTCGTGACACGTGACCAAGTTGATAAATTAAAAAAATGGGTCTCCCTTAAATTTAGTGACACCTATGGTAACCCTGATGAGTCATTATTATTGCAACACATTTCAACCTTTGTTGTCACAACCTCTTTGGTTTGGGTTAGTATGATTGAATCAGAGGAACAATTCAATTATAATAAAAATGTTAATAATAATAAGGAGGATCACTATGAAGAAATCTGCCATTTGGTGTTTCTAGCTGATTGCCGTGGCTATGTTGAATTTTGTGTCCCTCCAAATTACTTTGGAAATTGTCTAGACACTGCGTTTGTGGCACTCAAAAGGGGTGACATATTAGGAGAAAATAATGGGTTTGTTAAGGTGGCAAGTGCAATTGAGAGTAAAATTAGAGAAATGAAAAGAGAAGCACTTAGAGATGGTGAAAATATTATGAGAAGGTATAAGAAATTAGCTATGGCTGGTGAAAGCTTGATTGTGGTTGCTGGGTCACCAAAATTGGGAGTGTATGAAACTGATTTTGGGTGGGGGAAGCCTAGAAAATCTGAAGCGGCACATCTTGAATCATCAGGTTCAATTTCTCTTTCTGATAGTAAGATTAAAGAAGGGGCAATTGAAGTTGGATTTTCACTTGAATGGTCTAGAATGAATCTATTTATCAACATCTTTGAACAACACATCAAAAGTGTTCATCATAGTTTGTCAATGATGACCAATTTGAATTGA 1518 0.4025 MAAKTNNHHEVNIIEQSQVAPPQGSLPSKTLSFTFFDIPWFLCHPVKRIFFYHFPYSTNHFLQSSLPPLKHSLSLTLQHFFPFASKLIVPPQPQQPFIAYHQGSDSINLTVAESKADFNVLVSDLPQDARDWHPLIPSLPPEVTLENGTRVIPLMAIQLTIIPNSGFSISLTFNHLVADGKSLHHFIKFWAKLCNHIVTNGGNNLGSFVEGSNGNLPLPSHDRGKVKDPKGHMQVYLEDLRNSDFQSMKFRGLVNDASTDKARGTLVVTRDQVDKLKKWVSLKFSDTYGNPDESLLLQHISTFVVTTSLVWVSMIESEEQFNYNKNVNNNKEDHYEEICHLVFLADCRGYVEFCVPPNYFGNCLDTAFVALKRGDILGENNGFVKVASAIESKIREMKREALRDGENIMRRYKKLAMAGESLIVVAGSPKLGVYETDFGWGKPRKSEAAHLESSGSISLSDSKIKEGAIEVGFSLEWSRMNLFINIFEQHIKSVHHSLSMMTNLN 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120831g00010 505 Gene3D - 258 494 IPR023213 -
Stsc120831g00010 505 MobiDBLite consensus disorder prediction 1 23 - -
Stsc120831g00010 505 PANTHER - 11 493 - -
Stsc120831g00010 505 Pfam Transferase family 11 488 - -
Stsc120831g00010 505 Gene3D - 6 251 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120831g00010 Stsc-Chr120831 38212 40730 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120831g00010 49 483 Monolignol Biosynthesis Gene Families AT5G48930 23.747 9.74e-16 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120831g00010 - - ahf:112707065 602.053