Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120831g00009 ATGGGAAAGCTTAGTGAAGACGATGAACATAAACTAGTTGAGAAATCTCAAGTAGCACCAAATAATCCCAAAACCACATCTTTCCCTCTTACATTCCTTGATATATCATTGGCAGGTCCAATCTATGGTAGACGCCAATTCTTCTATAACTTCCCTTACTCCACCCACCATTTCCTCCAAACTACATTCCCAACTCTCAAACGCTCTCTTTCTCTCACCCTTCAACGTTTCTTCCCTCTCGCCGGTAGCCTCTTATGTCCTCCACCACCACACCCTCCCTTTGTCCGATGCACTGAGGAAGACTTCGTGACCTTCATGGTCTTTGAGTCCTCCTCAGATTTCAACCATCTCTCCGGCAACAACCCTAGAATTCTAAAGAAATTGGATCAATTGGTTCCCAAGTTGACTTGCAAAATAATACATCATCATCATGATACACTTATTTTTCCAAATTTGGCCTTGCAAGCCACGATTTTTCCAAACCGTGGCGTTTGCATTGCCATTACGTATAATCACGTGATAGATGGCACGTGCTGCGCTCAATTCATGAATTTTTGGTCTTCTCTTTGTGCACGTGGAATTGACTCCTCAGTTTTCGAGAAGTTAACTCCACCATGTTTCGATAGGGAAGTACTAAAGGACCCCAAGGAGCTTGGGGCCATTTTCTTGAAAGATTATTTTCAAGATAGGGAAAATTGGAAGAATAAACTCATCGATCATAGTCGACCTTTCGATTCAACCGTTTTTATGGAAGAGGACCATGTCAGGGTAACTATTGTATTTGACAAACATGACATCGAGAGAATGCAAACCTTCTCACTGAACCAACTGAAGAAAAAATACGGATTAAAATCGCCGCAATATGTATCCAAATTCGTGGTGGCGTGTGGTTTCGCATGGAGTAGCTTGGTTAAAGCAAGAGCTATAGAAAGAGATAGCGAGGACGGCGACGACAACGAAGAAGAGGAGTATTTTTGTTTTGCGGCGGATTGTAGGGGACGGTTAGAGTACCCGGTACCGGAAAATTACTTTGGAAACTGCATAACACAATGCAACGTGACGCTGAGAGGAAGTGAGGTGAATGGTGAAGGTGGTTTTGTGAATGCGGTGAAGGCGATAGATAGGGCTATAAACGACATGAAGAAGGAGCCGTTTGGAGGTATGGAGAATTGGAAAGAGAGCTTGAAGAAGATGTTTGGGTCCGGGAGAGTGTTGGTTGTGGGAGGGTCACCAAAATTTAAGGTTTATGAGAACGATTTTGGTTTTGGAAGGCCTTGCAAAGTGGAAATGGTGCAGTCCCTCAAGGGTTTGTCTATTGCTGAAACTCCAAACAACCAAGGAGGATTCGAGCTTGGTGTCGTTTTGAAGAACATTAGCCAATCTAAAACCTTTCTTAGTGTCGTTAAACAAGGCCTTAAAGCTTTGAAATAA 1431 0.4312 MGKLSEDDEHKLVEKSQVAPNNPKTTSFPLTFLDISLAGPIYGRRQFFYNFPYSTHHFLQTTFPTLKRSLSLTLQRFFPLAGSLLCPPPPHPPFVRCTEEDFVTFMVFESSSDFNHLSGNNPRILKKLDQLVPKLTCKIIHHHHDTLIFPNLALQATIFPNRGVCIAITYNHVIDGTCCAQFMNFWSSLCARGIDSSVFEKLTPPCFDREVLKDPKELGAIFLKDYFQDRENWKNKLIDHSRPFDSTVFMEEDHVRVTIVFDKHDIERMQTFSLNQLKKKYGLKSPQYVSKFVVACGFAWSSLVKARAIERDSEDGDDNEEEEYFCFAADCRGRLEYPVPENYFGNCITQCNVTLRGSEVNGEGGFVNAVKAIDRAINDMKKEPFGGMENWKESLKKMFGSGRVLVVGGSPKFKVYENDFGFGRPCKVEMVQSLKGLSIAETPNNQGGFELGVVLKNISQSKTFLSVVKQGLKALK 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120831g00009 476 Pfam Transferase family 14 458 - -
Stsc120831g00009 476 PANTHER - 11 474 - -
Stsc120831g00009 476 MobiDBLite consensus disorder prediction 1 15 - -
Stsc120831g00009 476 Gene3D - 10 238 IPR023213 -
Stsc120831g00009 476 MobiDBLite consensus disorder prediction 1 20 - -
Stsc120831g00009 476 Gene3D - 251 474 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120831g00009 Stsc-Chr120831 31442 32996 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120831g00009 25 457 Monolignol Biosynthesis Gene Families AT5G48930 23.144 2.76e-15 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120831g00009 - - aprc:113855905 543.502