Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120830g00004 ATGGCGGAAAAAAGCAGTGAGTTGAAGCTTTTGAGTGCATGGTTCAGTCCAATGGCCTTAAGGGCGAAGATCGCACTTAACATCAAAGGATTGGAATATGAGAACGTTGAAGAGGACTTTAACTCCAAGAGTCACCTTCTTCTTCGTTCAAATCCTGTGCACAAGAAAGTTCCAGTTCTAATTCATGGTGAGAAATCCATATGTGAATCCTCAATCATAGTTCAATATATTGATGAGGTTTGGTCCAATAATAATGCTCCTTCTATCCTTCCTCAACATGCTTATGACAGCGCAATTGCTAGATTCTGGGTTTCCTATATTGATGAAAAGTTATTTGTTTGCGCAAAGAACATTCAAGATGCTGGTAAAAGTGACGAGGAAAAGAAGCCACACTCTGAGCAATTAGAGGAAGAAATGCTTGTGAGGTTGGAAGAGGCATTCAACAAATGCAGTGATAAAAAGCCCTTTTTTGGAGGCAACAATATTGGACTCATTGACATTGCCTTAGGGAGCTTCCTCCCTGTTTTAGGTCTCATAGAAGAGATTAATGGAAGGATGGTCCTTGTGGAGGACAAGTTTCCGGGGTTGATAAATTGGGCAGTGAATTTTGCTGCGAATCCGGCTGTGGCTGGAACTTTTCCTGAGATTGACAAGCTTATTTTGTTTGGCAAGACTCTCTTAAAAAAAATGGGCTATTGCTTATAA 705 0.4057 MAEKSSELKLLSAWFSPMALRAKIALNIKGLEYENVEEDFNSKSHLLLRSNPVHKKVPVLIHGEKSICESSIIVQYIDEVWSNNNAPSILPQHAYDSAIARFWVSYIDEKLFVCAKNIQDAGKSDEEKKPHSEQLEEEMLVRLEEAFNKCSDKKPFFGGNNIGLIDIALGSFLPVLGLIEEINGRMVLVEDKFPGLINWAVNFAANPAVAGTFPEIDKLILFGKTLLKKMGYCL 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120830g00004 234 FunFam Glutathione S-transferase GSTU6 3 89 - -
Stsc120830g00004 234 SFLD Main.3: Omega- and Tau-like 4 230 IPR045073 -
Stsc120830g00004 234 CDD GST_N_Tau 8 81 - -
Stsc120830g00004 234 FunFam Glutathione S-transferase U9 90 232 - -
Stsc120830g00004 234 SFLD Main (cytGST) 4 230 - -
Stsc120830g00004 234 CDD GST_C_Tau 94 226 IPR045074 GO:0004364|GO:0006749
Stsc120830g00004 234 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Stsc120830g00004 234 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Stsc120830g00004 234 Pfam Glutathione S-transferase, C-terminal domain 99 207 IPR004046 -
Stsc120830g00004 234 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 11 218 IPR045073 -
Stsc120830g00004 234 Gene3D - 90 230 - -
Stsc120830g00004 234 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 93 227 IPR010987 -
Stsc120830g00004 234 SUPERFAMILY Thioredoxin-like 8 112 IPR036249 -
Stsc120830g00004 234 Gene3D Glutaredoxin 1 89 - -
Stsc120830g00004 234 SUPERFAMILY GST C-terminal domain-like 79 230 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120830g00004 Stsc-Chr120830 26196 28481 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120830g00004 5 229 Glutathione S-transferase Gene Family AT1G10360 50.667 1.56e-74 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120830g00004 K00799 - gmx:547576 266.159