Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc11g00026 ATGGTTCAGTACTATTGTGAAAAGAGTTTCTTGCTTGCTTCTTTTCATGTAATGTTAGTTGCAACTGCTGCAACAATATCACTTGCACTAGAACCACTAGCCTTCAACTATGATGAATTCACTGACAGAGGGGATACCTTGTATACTCCTGGTGATGTCTATGATGATAATGGATCCCTTCAACTCACGGAGCAGAAGAAAGATAGCTTTGGAAGAGTCATATATTACAAACATCTTCACCTTTGGGACAACACCACAGGCAAGGTCACAGATTTCACCACCCATTTCACTTTTTCCATCAACACCCCGAACAAATCCTACGATGGCGATGGCATCACCTTCTACCTAGCAGAGCCCGGCTTTCCAGTCCCTGATCCAAGAGATGGCAGTGGCATTGGTCTCGTGAGCCGTTCTCAACTCAATAATCCAAACTACACAACAGAACATCCTTTTGTGGCAGTGGAATTTGACACCTTTTCCAATGATTGGGATCCTCCGTTTGACCATGTTGGTATTGATATCAGAGCTATCAGGAGTGCTTACAAAACACAATGGTTCAGTAGTAGGGATGAGAGAGGTTATGATGCTGTTATTACTTACAATTCTAGTTCCAACAATCTGAGTGTGTCTTTCACAGGGTACCAGGATAATATCACAAAAATTGTGCAGCACTTGTCTTGTGAAGTTAATCTGAGAAATGTTCTGCCAGAATGGGTTGAATTTGGATTCACTTCAGCAACGGGGTACTACTTCGAGTATCACACCCTTAGCTCATGGTCCTTCAACACTAGTTTTGGCACTCATGAAGAAACTGACCAGAATGGAAGCAAGAAAGGCTTGGTGATAGGGCTAGGTGTTGGTGCAGGTGTTTCAATCTGTGTTTTGGCACTGGCCTTCTTTATGGGATGGAAGTTGAGGAGCAGAAAAAGAAGAGGGAGTTTTGATGTTGCTATGGACAGAGATTTTGAAAGAGGCACTGGACCTAGGAGGTTTTCTTATGAAGAACTTTCTAGAGCAACTAATAATTTTGCAAAGGGGCATAAAATTGGAGAGGGAGGTTTCGGTGGAGTTTACAAAGGATTCTTAAGAGATTTGAACATCCATGTTGCTATTAAGAGGATATCTCAGGGATCAAAACAAGGGGTGAGGGAGTATGCATCTGAAGTCAAGATTATTAGCCAACTGAGGCACAAGAATTTGGTTCAGCTCATTGGATGGTGTCACCAGAAGAATGACCTTCTGTTGATTTATGAGTTCATGGAAAATGGAAGCCTGGATTCCTATATATTCAAAGGTAAAAGCTTGTTAACATGGGAAGTAAGATATAACATTGCTAGAGGCTTGGCTTCATCTTTATTGTACTTGCATGAAGAGTGGGGGCAATGTGTGCTTCATAGGGACATCAAACCCAGCAATGTTATGTTGGATTCTAATTTCAGTGTGAAGCTTGGAGATTTCGGATTAGCAAGACTGATGGACCACGGGACAGAATCGAAAACGGCAAGTTTAGCTGGAACACTGGGATATCTGGCTCCTGAAGCTGCCACAAGAGGCAAGGCTAGCAAAGAGTCTGATGTGTACAGTTTTGGAGTTGTTGCATTGGAGATAGCTTGTGGAAGAAGGATCATTGAACAAAATCAAAATGCAAATCAGATCCACTTGGTGGATTGGGTTTGGGGACTGCATGGCAGAGGTAATCTCGTAGAAGCAGCGGATCCAAGATTATATGGTGTTTTCAATAAAGAAGAAATGGAGAGGCTAATGATTGTTGGACTTTGGTGCACTCTTACTGAGTACACTATGAGGCCAACGATAAGGCAAGTGGTTCTTGTGCTTAACTTTGAAGTTCCATTGCCCACTCTCCCATCAGAGCTTCATTCTTCGAACTATTTGATCCCAAGGATTAGTTCTGCTTCTGGAAATAACCATAGCCAGCCTTCAACTTCAAGCAATAGCTCTCTCACCACAGGGTCTTCTTCAGAATCGTCTAAACTTCTAGGAACATGA 2007 0.4245 MVQYYCEKSFLLASFHVMLVATAATISLALEPLAFNYDEFTDRGDTLYTPGDVYDDNGSLQLTEQKKDSFGRVIYYKHLHLWDNTTGKVTDFTTHFTFSINTPNKSYDGDGITFYLAEPGFPVPDPRDGSGIGLVSRSQLNNPNYTTEHPFVAVEFDTFSNDWDPPFDHVGIDIRAIRSAYKTQWFSSRDERGYDAVITYNSSSNNLSVSFTGYQDNITKIVQHLSCEVNLRNVLPEWVEFGFTSATGYYFEYHTLSSWSFNTSFGTHEETDQNGSKKGLVIGLGVGAGVSICVLALAFFMGWKLRSRKRRGSFDVAMDRDFERGTGPRRFSYEELSRATNNFAKGHKIGEGGFGGVYKGFLRDLNIHVAIKRISQGSKQGVREYASEVKIISQLRHKNLVQLIGWCHQKNDLLLIYEFMENGSLDSYIFKGKSLLTWEVRYNIARGLASSLLYLHEEWGQCVLHRDIKPSNVMLDSNFSVKLGDFGLARLMDHGTESKTASLAGTLGYLAPEAATRGKASKESDVYSFGVVALEIACGRRIIEQNQNANQIHLVDWVWGLHGRGNLVEAADPRLYGVFNKEEMERLMIVGLWCTLTEYTMRPTIRQVVLVLNFEVPLPTLPSELHSSNYLIPRISSASGNNHSQPSTSSNSSLTTGSSSESSKLLGT 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc11g00026 668 Gene3D Transferase(Phosphotransferase) domain 1 420 632 - -
Stsc11g00026 668 SMART serkin_6 343 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc11g00026 668 CDD lectin_legume_LecRK_Arcelin_ConA 33 265 IPR001220 GO:0030246
Stsc11g00026 668 Pfam Protein kinase domain 344 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc11g00026 668 Pfam Legume lectin domain 34 274 IPR001220 GO:0030246
Stsc11g00026 668 CDD STKc_IRAK 349 613 - -
Stsc11g00026 668 ProSiteProfiles Protein kinase domain profile. 343 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc11g00026 668 Gene3D Phosphorylase Kinase; domain 1 328 419 - -
Stsc11g00026 668 Gene3D - 31 278 - -
Stsc11g00026 668 PANTHER - 57 616 - -
Stsc11g00026 668 ProSitePatterns Protein kinases ATP-binding region signature. 349 372 IPR017441 GO:0005524
Stsc11g00026 668 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Stsc11g00026 668 ProSitePatterns Legume lectins alpha-chain signature. 235 244 IPR000985 -
Stsc11g00026 668 FunFam Lectin-domain containing receptor kinase A4.3 420 632 - -
Stsc11g00026 668 MobiDBLite consensus disorder prediction 637 668 - -
Stsc11g00026 668 SUPERFAMILY Concanavalin A-like lectins/glucanases 33 265 IPR013320 -
Stsc11g00026 668 ProSitePatterns Legume lectins beta-chain signature. 152 158 IPR019825 -
Stsc11g00026 668 SUPERFAMILY Protein kinase-like (PK-like) 327 622 IPR011009 -
Stsc11g00026 668 FunFam L-type lectin-domain containing receptor kinase IX.1 328 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc11g00026 Stsc-Chr11 133997 136003 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc11g00026 9 630 Receptor kinase-like Gene Family AT5G10530 43.465 5.64e-167 491
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Stsc11g00026 Pkinase 1.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc11g00026 - - gmx:100783420 818.15